G76197


Basic Information

Item Value
gene id G76197
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 24279494 ~ 24280790 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU102676
TATTAAGTGCTGACAttcgttttatatatattaaaaaacaacatgtGAAAGGGGGGTATCAATATCACATTACATTTTATGGCATTATTATTTCAAAGGGAATAATATTTGTccatttatataataaacagttacccTCCTCGCCTCCAAACAACAGGGGTGAGGATTCGACACAAAcaacgaagaaaaaaaaataaacacatgaaaaaTAGCATCCGATTCTTCAACTTTCTATTAATAAAGTGTATGAAAAACATGATGCATAGCATGACGGGCCTGTGCACAACAGTAGAGTGCCAGCTGTGCATGAGCTTGCACTGATGTCACTGACCCtgcgtgtagtgtgtagtgtgtatgagCTGCATTGATTCAATACCATTGATTGTGGTGGAGCGTTGCCGTGGCCGTGCGCTTTTAGCCGAGGCAGTATTGGATAGGTGCAACAAAGTGGTCCCAGAGTTGGCAACTCAGGTTAAGAGAAGACTTCATATGGCTATatcagcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatctgtgcgtgtttctctgtgtatctgtgtgagaGCGCACATATCTCTTCTGCCCATCAGCCTCCTGATGATTATGATAAACAGAGTTCCTGCTAATGAATGTGTGTAATTTGAGGGGTAGCTTCACACACATACCCATCCACCCTCCCTtccacacacaaacttacacacCAAACacgtgcactcacacacacacacacaggagagtTGAATCTCCAGGCTTCAGAAGCAGACAGGTGTGAATCAGGATCAAACTGCAGTTCAACTAAATGGTGCACATAAGAAAGTGACATtccctttccttctcttttctctctctctctctctcactcgctcgctcCTCTTCTTCTTTGGCACACTGGGATGTGAAGTGGGGGAGGAGTGGATTGTCCCTCATTCTATTTTCCTGTCCCCCCTCTCCTTCGTtcactcattctttctttctctctctcttgcgtgTCCTCTATTTAGAGAGTTTACTGATCACTCGAATAAGCGCTCCATTCTCATCCTTCAGCCTCTGGTTGTCCGCTTTTAAATCC

Function

NR:

description
PREDICTED: uncharacterized protein LOC103376870

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102676 True 1081 lncRNA 0.44 2 24279494 24280790

Neighbor

gene id symbol gene type direction distance location
drd4 drd4,drd4a,LOC107726856,LOC107551439,LOC107674856,LOC107561186,LOC107655149 coding upstream 53780 24211986 ~ 24225714 (+)
ap4e1 ap4e1,LOC107571341 coding upstream 147460 24120508 ~ 24132034 (+)
LOC103032917 gnb5,LOC108432683,LOC105018176,LOC106584742 coding upstream 162200 24109205 ~ 24117294 (+)
myo5c myo5c coding upstream 171670 24083792 ~ 24107824 (+)
LOC103034513 arpp19,LOC107569706,LOC107740885,LOC107720800,LOC107670207,LOC107673248,LOC107559970 coding upstream 228962 24048540 ~ 24050532 (+)
LOC103029535 pidd1 coding downstream 61953 24342743 ~ 24359175 (+)
LOC103029007 si:dkey-201c1.2,slc25a22,LOC107561181,LOC107732297,LOC107551436 coding downstream 80624 24361414 ~ 24401725 (+)
LOC103028282 syt7,LOC108432693,LOC107754343,LOC107551433,LOC107655153 coding downstream 145339 24426129 ~ 24647549 (+)
fads2 fads2 coding downstream 444354 24725144 ~ 24740083 (+)
myrf myrf coding downstream 521212 24802002 ~ 24860926 (+)
G76060 LOC103039440,LOC108432681,LOC105892437,LOC107673304,LOC107740884,LOC107569705,LOC102199411,LOC100711429 non-coding upstream 237878 24040374 ~ 24041616 (+)
G75988 NA non-coding upstream 302072 23977065 ~ 23977422 (+)
G75957 NA non-coding upstream 496501 23782032 ~ 23782993 (+)
G75889 NA non-coding upstream 986352 23292836 ~ 23293142 (+)
G75882 NA non-coding upstream 1004481 23274570 ~ 23275013 (+)
G76202 NA non-coding downstream 8602 24289392 ~ 24291726 (+)
G76217 NA non-coding downstream 160295 24441085 ~ 24462559 (+)
G76219 NA non-coding downstream 173421 24454211 ~ 24456691 (+)
G76225 NA non-coding downstream 246841 24527631 ~ 24563160 (+)
G76226 NA non-coding downstream 280874 24561664 ~ 24586132 (+)
G76192 NA other upstream 18988 24258509 ~ 24260506 (+)
LOC103035272 LOC108432640,LOC107569703,LOC107720762,LOC107670190,LOC107740887 other upstream 196650 24053061 ~ 24082844 (+)
LOC103038709 LOC103038709,LOC108432651 other upstream 241633 24032092 ~ 24037861 (+)
G75974 NA other upstream 361891 23915791 ~ 23917603 (+)
G75938 LOC105900730,LOC105912833 other upstream 791624 23487530 ~ 23487870 (+)
LOC111193110 NA other downstream 592610 24873400 ~ 24898537 (+)
G76358 NA other downstream 665998 24946788 ~ 24948149 (+)
LOC103022391 parvb,LOC108432702 other downstream 694151 24974941 ~ 24983714 (+)
LOC103022708 NA other downstream 707606 24988396 ~ 25004515 (+)
G76423 NA other downstream 903295 25184085 ~ 25184732 (+)

Expression


Co-expression Network