G76219


Basic Information

Item Value
gene id G76219
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 24454211 ~ 24456691 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU102729
aaaaatacacctaCCTACCTCAATTTCACTTCACTGggggtgttccatagacaaatcctaaccatttgttccttagctctgaataactgggcaaagcatatgacactgatgtgatatttgcacaaataatatAGAAACAAACTGCCATACTGTTCCGAGACGCCGTCGCTgtccggcttcagctctgcctgtagGCGGACGCAAGTCAAGGTGGGCGAGGTCATGAATACTAATTTACGGGTTTAAGTAGACACGGGGCATTTCCTGATCAACATTCTGTAAAAAACGATGACTAAAAATTGGAATTGGAGAAATCTCTCTGAACATGGGACAGTGCTGATGATCTATACTGGATGCTAGTGATCTTCGGGCCCTCGggtggcactgcattaaaaacaggcatGATTCTGTattggaaatcactgcatgggctCAGGAACAGTTCCAGAAATCATTGTTAAAGCTTTACCCTGCAAAGAAGAAGCCACATGTCTTCTCTGGGCCAAATTGGAACAATGTTCTGAGCTAAGATTAATCAAAATGCCTAATTCCTTTGAAAAGCAGGAATGCCTATTCCAGCGTACTTTAGCTACTGTGGGGCGTGGCAAAAGTCAAGTGGCATATCtgaaaatgtttgtttcttCTGTATCTACCAAACAGTGAGCAGGTTGGTTTATATCCCATGTCCTGCTTTGTGAAGAACGCACCCTGCTTTTTCATTATGGATGGTGATCCACACTCTACCCAGTCCTGTACTGTACTACAGAGCTTTTAATATCCTGCTATTTACAGAGTCAATATTGAATCCAACATTCTCTGCAAAACACCTTTATGGctttgatacacacacacacacacacacacacaaaaggttCTGCGCGAGACACAAATACAAGGAAATGTGTTTTAGCAAATATACACTAGATACTACGTCTCTGAGGTTAGAGGACTGAGAGTCAACAAAGTTACACACCCGAATCCTTATTACAAATAAAGTAGTTCCCACTTGTTCAGTTTCATTTAAGTTCCTCCTTCCCACTGTGTGTATTGAATGAAGAActgtctgtatatgtgtgtgtgtgtgtagtcctTGAAAAaactatgtatatttttatcacCCTTGAATCGTTTATAAGGCACTCATCTGAATCTAGGCGAGGCTTTGCATGACTGTGGTTGTGAGCGTCTGAGCTTGTTTGTGAGAAGgatggaaagagagaagagagatagaagagagaTAAAGGAGAGTAAGAAACCGAGAGATGAGTTCTAGTGATCTATGTAGTCTGCCCCTCTTTGTCCTAATGCAAAATAAATGCTATTATTATTACGTAACCGGCgtgcgcacacacatacacacgcacacggCTGATAATTACGCTGCTAATATTATCTGCGTGTGATGTGCCTATACCCTGGGTGATAAAGCTCATTATCAGATACGGGCCTGTATGTGACTGAGTGGATGGCTTAGATAATCATACTGTTTTGCATTAGGTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102729 True 1502 lncRNA 0.42 2 24454211 24456691

Neighbor

gene id symbol gene type direction distance location
LOC103029007 si:dkey-201c1.2,slc25a22,LOC107561181,LOC107732297,LOC107551436 coding upstream 52486 24361414 ~ 24401725 (+)
LOC103029535 pidd1 coding upstream 95036 24342743 ~ 24359175 (+)
drd4 drd4,drd4a,LOC107726856,LOC107551439,LOC107674856,LOC107561186,LOC107655149 coding upstream 228497 24211986 ~ 24225714 (+)
ap4e1 ap4e1,LOC107571341 coding upstream 322177 24120508 ~ 24132034 (+)
LOC103032917 gnb5,LOC108432683,LOC105018176,LOC106584742 coding upstream 336917 24109205 ~ 24117294 (+)
fads2 fads2 coding downstream 268453 24725144 ~ 24740083 (+)
myrf myrf coding downstream 345311 24802002 ~ 24860926 (+)
LOC111193061 NA coding downstream 409099 24865790 ~ 24871366 (+)
LOC103024697 NA coding downstream 442345 24899036 ~ 24919450 (+)
LOC103025216 NA coding downstream 470322 24927013 ~ 24946686 (+)
G76202 NA non-coding upstream 162485 24289392 ~ 24291726 (+)
G76197 NA non-coding upstream 173421 24279494 ~ 24280790 (+)
G76060 LOC103039440,LOC108432681,LOC105892437,LOC107673304,LOC107740884,LOC107569705,LOC102199411,LOC100711429 non-coding upstream 412595 24040374 ~ 24041616 (+)
G75988 NA non-coding upstream 476789 23977065 ~ 23977422 (+)
G75957 NA non-coding upstream 671218 23782032 ~ 23782993 (+)
G76225 NA non-coding downstream 70940 24527631 ~ 24563160 (+)
G76226 NA non-coding downstream 104973 24561664 ~ 24586132 (+)
LOC111193114 NA non-coding downstream 110113 24566804 ~ 24710951 (+)
G76349 NA non-coding downstream 464444 24921135 ~ 24922440 (+)
G76367 NA non-coding downstream 527461 24984152 ~ 24984391 (+)
G76192 NA other upstream 193705 24258509 ~ 24260506 (+)
LOC103035272 LOC108432640,LOC107569703,LOC107720762,LOC107670190,LOC107740887 other upstream 371367 24053061 ~ 24082844 (+)
LOC103038709 LOC103038709,LOC108432651 other upstream 416350 24032092 ~ 24037861 (+)
G75974 NA other upstream 536608 23915791 ~ 23917603 (+)
G75938 LOC105900730,LOC105912833 other upstream 966341 23487530 ~ 23487870 (+)
LOC111193110 NA other downstream 416709 24873400 ~ 24898537 (+)
G76358 NA other downstream 490097 24946788 ~ 24948149 (+)
LOC103022391 parvb,LOC108432702 other downstream 518250 24974941 ~ 24983714 (+)
LOC103022708 NA other downstream 531705 24988396 ~ 25004515 (+)
G76423 NA other downstream 727394 25184085 ~ 25184732 (+)

Expression


Co-expression Network