G76274


Basic Information

Item Value
gene id G76274
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 24633827 ~ 24659292 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU102795
ttattttattttatatcatagAACATAGTAAGAGCTCAGCTCCATAGCTCCACCCACcccacacacccaaacacacagagGGGTGGGGGCAGACAGGAAAACATATATATCAACCAATTAAATCACAGTCCGCTCGGCCAAAAAAACAGGAGAGGCAGAAAAAAACGGGAACGCTTATCCTTCCATGTCGCCGGGTGGAGCTCAGTCACGCCCCTGAACTCTGACCTCACTCCTGACCAGGCCGAGAAAAGAAAACCGAGTCGACAGCGGTCAGCACACAACAACAAGGCATGTTCAGATATTCTGCATGAGAATGTGGCTTTACTGAGATTCTCCAGACTCCAGAATTCTGATGTGAAGATGGGTGTGGAGTGCTGTTAAAGTACCGAGGCGTGCAGCACAGAATGCAACAACCCAGAACTACACTCACGttcctgtaaacacacacacacatacaagctCACGACGACGACTACAGGACGACACACATTTGGTTGGACACTAGCACGTTGTAGGACTTTTTGGATAAAGAGAAAGATTGGAGATGGGACTTAATCTGTAATATATTCcattagtttatatttatttgtcacTGGAAGAACCTTAAATTAGTACTCAGTTTGAAAAGGCTGACCTTTACGTGAACTGTGTCCCAAAGTCTAGGTTGCATTTAAGGCAAAATGCATTTCTTGGCCATTAGAAGGCTGTTCCAAAGAGAAGGACACATTATAATATACTGTTGAGAACTGCAGCTGTCATTTGGAGAGATTTAgaggacgcaactgatgtatccttcctggTCCTTTGCGATTACATGCGATTACATGACTACTTAAACCAGGCAAAAATGGCAGAAAACAAGCCTTTTGGATTAGAGACCATTGAaaaaactgcagctgaaattCGGAGAGATTTAgaggacgcaactgatgtatccttcctggTCCTTTGTGATTACATGACTACATaaactgggcaaaaatggcagaaaaaaaaacgagccCACCACACGGCCTTTTTAAATTGTGGAAAATGGTGACCAATAGACTAGTGAGGACCAGTCTTGCCTGGCATGCAACATAGACTTTGGAATAGACATAAAATTGTCTAAAATATCTTTGAAGTTCTGTTGTAAGATGTCCTATAAAGcttgttgtcttgtcttgtttggGGCAGTAACTATACATAATTTGGGGTATGAACAGCACAATCAGCACAAACCTGCCATTAGGCATGTCGTCATGCACTgctcatcactgattggtggatgCTTATGGCTGTTGTTTTACAGTGTGACTAACAGCAGCTCACACCTGCAGCATATCTTTGACACATTCGTAAGTGATTAGTCTCTTcgctttcgttttttttttttttaattggtttcCACAAATTGGGTGATTGGAAGAAAAGAGCACAACGGAAGTATAAGGAAGAGGTGTGGAGGGCAAGCGTTAAGGAGCGCTTCATCTACATAATGACATtccacacatgacacacacacacacacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102795 True 1520 lncRNA 0.43 2 24633827 24659292

Neighbor

gene id symbol gene type direction distance location
pnpla2 LOC108432691 coding downstream 297605 24322366 ~ 24336222 (-)
LOC103030184 LOC108432690,LOC108274702 coding downstream 313023 24279477 ~ 24320804 (-)
pgghg pgghg coding downstream 359628 24262747 ~ 24274199 (-)
LOC111193112 NA coding downstream 445625 24184569 ~ 24188202 (-)
LOC103025218 NA coding downstream 453180 24157139 ~ 24180647 (-)
LOC103024275 lrrc10b,LOC107754340 coding upstream 47380 24706672 ~ 24710102 (-)
eps8l2 eps8l2 coding upstream 83477 24742769 ~ 24788358 (-)
LOC107197705 NA coding upstream 289752 24949044 ~ 24950022 (-)
LOC103023960 kiaa1644,LOC108274641 coding upstream 354001 25013293 ~ 25101100 (-)
mpi mpi,LOC106560745,LOC106584640 coding upstream 657834 25317126 ~ 25327553 (-)
G76272 NA non-coding downstream 95140 24528071 ~ 24538687 (-)
G76266 NA non-coding downstream 232114 24395212 ~ 24401713 (-)
G76247 NA non-coding downstream 354739 24278840 ~ 24279088 (-)
LOC111193111 NA non-coding downstream 443514 24188344 ~ 24190313 (-)
G76095 aromatase,LOC103156494,LOC106947725,LOC106932411,LOC102236527 non-coding downstream 500182 24127647 ~ 24133645 (-)
G76288 NA non-coding upstream 55918 24715210 ~ 24715538 (-)
G76292 NA non-coding upstream 68019 24727311 ~ 24736269 (-)
G76340 NA non-coding upstream 186749 24846041 ~ 24860482 (-)
G76372 NA non-coding upstream 232869 24892161 ~ 24892392 (-)
G76376 NA non-coding upstream 261881 24921173 ~ 24922447 (-)
deaf1 deaf1,LOC107726848 other downstream 373297 24240898 ~ 24260530 (-)
LOC103042310 ucmab,ucma,LOC107720768,LOC107569716,LOC107673257,LOC108275358,LOC107559968 other downstream 800759 23827214 ~ 23833068 (-)
LOC103033738 LOC103033738,LOC108444230,LOC106560753,LOC105008418,LOC108274439,LOC107549618,LOC107686877 other downstream 1267611 23324577 ~ 23366216 (-)
LOC103024007 LOC108428399 other downstream 2059814 22442736 ~ 22574013 (-)
LOC111193105 LOC102794092,LOC108274651,LOC107571202,LOC108428364 other downstream 3360810 21269504 ~ 21273017 (-)
LOC103025724 tmem80 other upstream 131900 24791192 ~ 24798616 (-)
G76377 NA other upstream 255006 24914298 ~ 24920365 (-)
G76424 NA other upstream 524917 25184209 ~ 25184469 (-)
rab3il1 rab3il1,LOC108429468,LOC107549590 other upstream 623497 25282789 ~ 25301768 (-)
LOC103031319 coro2b,LOC108412540,LOC105018662,LOC107549656,LOC107738688 other upstream 2197337 26856629 ~ 26878862 (-)

Expression


Co-expression Network