G76349


Basic Information

Item Value
gene id G76349
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 24921135 ~ 24922440 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU102914
atatctggctgtgtttatgaatacttataggttcaatatagacacccaatatgccattttaaagcttttcagttatctagcctatttaaccgtatctcctttcagaaaataaacatttagggcgaaatatgcctagtttatgaaagttatgaaatattattttcatatttgcgtttttcgtacgtccatatttgatcgaatgcggacatgttatacaccattcgaaccgtctgcctctccggattacggaactgtgtttagagtttaaatctgcttgtgtttcgcTTTGTGTTTAACGTTAAGTTACCTCAGGACACTCGAGACACACACCCAACCCCCTCCAGCGCTTCCcccacactcttaccttcaaaacgcaatccagtcaccagtaattctcacatatatccaaacagtgctttaaataatttgaggcagaaaaaaacaatatcaacTTTAACGCGTTATTAAAAGCGGATTATCGCATATGTAATGAATCAGCAGACCCTCACAGACCAGacggtatgcaaatgagctctgtcagccaatcaggcgcCGAGTTCAGCGAGCTgaagggagggggggcaactAAGTCCCAGCACAGTTGTAGGAAGATTAGAATAAGACAGAAcacttcaatttatattattattaattcatgtttaagttttaatgacaATACCGATAGTgaagtaattcttatctatttatgtcaatagtagagagatagacaataaaggacagcaacatcagagacagacaatggagggcagcaacagagacaatggaacaaagcaacagacaactgaggtgagaaacagagacagacaatgaagtcacatcacagatgtaggaagtttgagtaacacttacatttatatcaaatttatgttaacagtggggagcaacagatgaacaaataaggacagcaacaacagattcacaacaaacttataatgaataaaatatgtctaaattaaaaggtttgaagtgtgctcgttagggggcattggagtagagagccaaatgaagtccacttttgggggaaaaagatcccccccataacaatgctggctacgggcctgtaAATAGTATTAATATTGGAGATACAAcctttatatttgttattttatattcgTTAAGAGCCTGGTTACTTTATTCCTAACCAGTTTGTGCCTTTTTTGCTGTACAAAAGATGAAAGAATGTAACTATTATATCAGTTATATGTTGCTTTTACGGTTTTGGGATGTGTGTTCATAGCATGCAGTTGTGcctgtgaaaataaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102914 True 1286 lncRNA 0.37 2 24921135 24922440

Neighbor

gene id symbol gene type direction distance location
LOC103024697 NA coding upstream 1685 24899036 ~ 24919450 (+)
LOC111193061 NA coding upstream 49769 24865790 ~ 24871366 (+)
myrf myrf coding upstream 60209 24802002 ~ 24860926 (+)
fads2 fads2 coding upstream 181052 24725144 ~ 24740083 (+)
LOC103028282 syt7,LOC108432693,LOC107754343,LOC107551433,LOC107655153 coding upstream 273586 24426129 ~ 24647549 (+)
LOC103025216 NA coding downstream 4573 24927013 ~ 24946686 (+)
hdac10 NA coding downstream 30385 24952825 ~ 24966947 (+)
LOC103044987 NA coding downstream 264185 25186625 ~ 25230901 (+)
gtf2h1 gtf2h1,LOC107572319 coding downstream 313979 25236419 ~ 25246778 (+)
hps5 hps5,LOC106584758 coding downstream 327190 25249630 ~ 25263215 (+)
LOC111193114 NA non-coding upstream 210184 24566804 ~ 24710951 (+)
G76226 NA non-coding upstream 335003 24561664 ~ 24586132 (+)
G76225 NA non-coding upstream 357975 24527631 ~ 24563160 (+)
G76217 NA non-coding upstream 458576 24441085 ~ 24462559 (+)
G76219 NA non-coding upstream 464444 24454211 ~ 24456691 (+)
G76367 NA non-coding downstream 61712 24984152 ~ 24984391 (+)
G76463 NA non-coding downstream 370965 25293405 ~ 25293928 (+)
G76468 NA non-coding downstream 394755 25317195 ~ 25318657 (+)
G76472 mpi,LOC106560745,LOC106584640 non-coding downstream 400953 25323393 ~ 25327069 (+)
G76505 neo1,LOC108275206 non-coding downstream 433824 25356264 ~ 25359567 (+)
LOC111193110 NA other upstream 22598 24873400 ~ 24898537 (+)
G76192 NA other upstream 660629 24258509 ~ 24260506 (+)
LOC103035272 LOC108432640,LOC107569703,LOC107720762,LOC107670190,LOC107740887 other upstream 838291 24053061 ~ 24082844 (+)
LOC103038709 LOC103038709,LOC108432651 other upstream 883274 24032092 ~ 24037861 (+)
G75974 NA other upstream 1003532 23915791 ~ 23917603 (+)
G76358 NA other downstream 24348 24946788 ~ 24948149 (+)
LOC103022391 parvb,LOC108432702 other downstream 52501 24974941 ~ 24983714 (+)
LOC103022708 NA other downstream 65956 24988396 ~ 25004515 (+)
G76423 NA other downstream 261645 25184085 ~ 25184732 (+)
LOC103026466 LOC108429386,LOC108274988 other downstream 348816 25271256 ~ 25281371 (+)

Expression


Co-expression Network