G76468


Basic Information

Item Value
gene id G76468
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 25317195 ~ 25318657 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU103141
GCCATGCCTACATTCCAAACCTTCACTGGAGGTAGCGCTCACATAAATATCGTCCATGTTGTGGACCTGAGGCTTAATCTGCCTCAGTTAATCACAGGTAAAAACGTACAGAATTTACAGTAAACAAACAGTAGGACAACTGTAATTCCTCATATTGTAGTATCTGAACTGCTGAGAAGCAGTATTTTGAGTGTGAGGAGAAAAGAGGGGCAGGAAGTATCTGTATCAACTTTCAAGTcagaaaatgaacatttttaaaaaacattttagtgtaGGATGTGCAACTTTTAAACCACATTTTAATGTGGTTACATAGCTTAAATGTACCCAACACAGGAAAGgtctgattaaaaaaagttacCACATCTTAgtaaactgagattaaaatattaaaatgactaaaaacgTCCCTGAATAGTGTGTTGGTGTTTTCACTACATGATAGAGACATGATTTTTAAACGATGTGGTAAACTCCTTTAAAAGTATAAAGTAGACGATCAGACCTGACTGTTTTCAAATATTAAACCGCAGCCAAGGAACAAATGTAATTCTTCTACCAGGTtgatttttaagtcaaacaTATTAAAGTAGAGAAAACATGCAAATGTGCATTCCCAAatctaaatgttctaaatgaggTGATCTCCAAAATCAAGAACCGAGCAGTTTTTGTgctattgttttaaaattcatGCACAGGCATTTTATAAGGGCTGAAGTGGATTACCCTAATTgagatatttattattttttacttggtATTTATCAGATAAAAGAATATGTGTGTCATGCTCACCCATAAGTAGGAATAACCTTATAATACTTTAACATAAAGAGAGATATGATCTGGCACTTCATAAACACTTCTACTAAACCATCACACTGTTATTCAAATGTCAAACCCCTAACTCAACTTCTGGAAAGGTTCAAACAACAGGACCAAGAGGAAAAGACACCGTAAATGTTCCCATATATGTgctggtgtgtatgtgtttgtgtgtttggtgtcaagccttttttactgtttgttcTCTCTCAGTCTGCATATTGCTGAAGTTAGTTTACAGTAGTTATCCTCAACAGTTGTGTTCCCTTGGATTCACTCACAAATAAGCAACATTAAGGGGTCTGACATCAACATATAAACTCAGTAGTATAATCAGATGTGTCCCATCAAGGAGAAAGACAACACTTAGAGACGAGACCCCCTTCACCTACAGCAGACAGCAGGCCCGGAACATAGTCATCCCAGTCGATGAGGTCACCTGCAGTGTGACGCTCTCATTGGCAGAAATGAAGAGCACAGAACCTCTCTGCAGCATCATGTCAGCGAGGGCAGCAGCCGAGGTAGCACTGGCCTCACCCTGGATCACCAGCAAAATTCCAGCACAGTCCAGTGGGCTCACGGTGTACTGCTTCACTGAAGAGG

Function

NR:

description
PREDICTED: Na(+)/H(+) exchanger beta-like isoform X1

GO:

id name namespace
GO:0016853 isomerase activity molecular_function
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function
GO:0016859 cis-trans isomerase activity molecular_function

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU103141 True 1431 lncRNA 0.39 2 25317195 25318657

Neighbor

gene id symbol gene type direction distance location
LOC103027043 LOC108429467,LOC108275406 coding upstream 880 25313291 ~ 25316315 (+)
LOC103045999 LOC108429466,LOC106561822 coding upstream 5032 25302235 ~ 25312163 (+)
LOC111193062 NA coding upstream 45941 25269678 ~ 25271254 (+)
hps5 hps5,LOC106584758 coding upstream 53980 25249630 ~ 25263215 (+)
gtf2h1 gtf2h1,LOC107572319 coding upstream 70417 25236419 ~ 25246778 (+)
LOC103046607 scamp2 coding downstream 8909 25327566 ~ 25346047 (+)
adpgk adpgk,LOC107549595,LOC107569355,LOC107754317 coding downstream 288130 25606787 ~ 25613446 (+)
LOC103023612 NA coding downstream 361436 25680093 ~ 25700055 (+)
dennd2a dennd2a,LOC107701048,LOC107724656,LOC107549597,LOC107669049 coding downstream 408294 25726951 ~ 25778572 (+)
LOC103024360 tead4,LOC101167205,LOC108246608,LOC107549581,LOC107669037,LOC103024360,LOC108429458,LOC103380343 coding downstream 477781 25796438 ~ 25830701 (+)
G76463 NA non-coding upstream 23267 25293405 ~ 25293928 (+)
G76367 NA non-coding upstream 332804 24984152 ~ 24984391 (+)
G76349 NA non-coding upstream 394755 24921135 ~ 24922440 (+)
LOC111193114 NA non-coding upstream 606244 24566804 ~ 24710951 (+)
G76226 NA non-coding upstream 731063 24561664 ~ 24586132 (+)
G76472 mpi,LOC106560745,LOC106584640 non-coding downstream 4736 25323393 ~ 25327069 (+)
G76505 neo1,LOC108275206 non-coding downstream 37607 25356264 ~ 25359567 (+)
G76514 neo1,LOC108275206 non-coding downstream 66630 25385287 ~ 25390947 (+)
G76526 NA non-coding downstream 232188 25550845 ~ 25551311 (+)
G76539 NA non-coding downstream 317174 25635831 ~ 25642628 (+)
G76464 NA other upstream 20727 25294501 ~ 25296468 (+)
LOC103026466 LOC108429386,LOC108274988 other upstream 35824 25271256 ~ 25281371 (+)
G76423 NA other upstream 132463 25184085 ~ 25184732 (+)
LOC103022708 NA other upstream 312680 24988396 ~ 25004515 (+)
LOC103022391 parvb,LOC108432702 other upstream 333481 24974941 ~ 24983714 (+)

Expression


Co-expression Network