G76536


Basic Information

Item Value
gene id G76536
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 25713432 ~ 25713850 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU103228
TAGTCTGGGGATGACTTTAAGGttatgatgtcacttcctcctTTGATAGAGTTCATCTCATTAGCCGCCTGGGTGGCAGAGGGGCTGTGAGAGAATTTTTCCTGTCAAAATAGGTTGGAAGGCTGCCGCGACAGGTTTTCGCTCTcacattttagtacaatgttcACTCACATGTTGATCAAGGGTTGAACATATGTAAATACATGATTGGAGGAATTACGGTTTGTCGACGTATCTGTTTGATACGTCGAAAGGGGGATTGTGGGAAATCTTACGAAGAAACCTTGTTTTACCTTGAATATATTGACAAGTATCTCACAatcatgattacttatcttggtatctaaaattacataatcatcTGTGAAACCCTGTATTTtgtatgcattaaccaatacttacaccacatttgatcattt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU103228 True 419 lncRNA 0.39 1 25713432 25713850

Neighbor

gene id symbol gene type direction distance location
LOC103023612 NA coding upstream 13377 25680093 ~ 25700055 (+)
adpgk adpgk,LOC107549595,LOC107569355,LOC107754317 coding upstream 99986 25606787 ~ 25613446 (+)
LOC103046607 scamp2 coding upstream 367385 25327566 ~ 25346047 (+)
LOC103027043 LOC108429467,LOC108275406 coding upstream 397117 25313291 ~ 25316315 (+)
LOC103045999 LOC108429466,LOC106561822 coding upstream 401269 25302235 ~ 25312163 (+)
dennd2a dennd2a,LOC107701048,LOC107724656,LOC107549597,LOC107669049 coding downstream 13101 25726951 ~ 25778572 (+)
LOC103024360 tead4,LOC101167205,LOC108246608,LOC107549581,LOC107669037,LOC103024360,LOC108429458,LOC103380343 coding downstream 82588 25796438 ~ 25830701 (+)
mansc4 mansc4 coding downstream 125502 25839352 ~ 25843928 (+)
LOC103028784 LOC108429384,LOC107549582,LOC106584451,LOC107558590,LOC106529550 coding downstream 146679 25860529 ~ 26053114 (+)
LOC103026929 LOC108429451,LOC107728337,LOC108275429,LOC107745105,LOC105018463,LOC106584495,LOC107701192,LOC107558594,LOC105913395 coding downstream 522930 26236780 ~ 26286442 (+)
G76552 NA non-coding upstream 58435 25652587 ~ 25654997 (+)
G76543 NA non-coding upstream 66954 25640587 ~ 25646478 (+)
G76541 NA non-coding upstream 68297 25636971 ~ 25645135 (+)
G76540 NA non-coding upstream 69509 25636480 ~ 25643923 (+)
G76539 NA non-coding upstream 70804 25635831 ~ 25642628 (+)
G76646 LOC108429453,LOC107701195,LOC107549599,LOC107728334,LOC108275118,LOC107668648 non-coding downstream 373339 26087189 ~ 26093193 (+)
G76655 NA non-coding downstream 431775 26145625 ~ 26146752 (+)
G76833 NA non-coding downstream 857330 26571180 ~ 26571399 (+)
G76838 NA non-coding downstream 965790 26679640 ~ 26679890 (+)
LOC111193118 NA non-coding downstream 970038 26683888 ~ 26685678 (+)
G76464 NA other upstream 416964 25294501 ~ 25296468 (+)
LOC103026466 LOC108429386,LOC108274988 other upstream 432061 25271256 ~ 25281371 (+)
G76423 NA other upstream 528700 25184085 ~ 25184732 (+)
LOC103022708 NA other upstream 708917 24988396 ~ 25004515 (+)
LOC103022391 parvb,LOC108432702 other upstream 729718 24974941 ~ 24983714 (+)

Expression


Co-expression Network