G76585 (adpgk,LOC107549595,LOC107745566,LOC107569355)


Basic Information

Item Value
gene id G76585
gene name adpgk,LOC107549595,LOC107745566,LOC107569355
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 25612125 ~ 25615351 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU103301
tttattgataaaaaaatattctgacctcaagttaccattagctagacagttttttttaatcttagaACACCAGGGCCTCTTAAATGGCCGTTTACTTTAAGACTTTTGCATAATGTCACATTTGTGCAAACTAACTTTACCCCACATAATATCTATAATGTCTTAAAATGaagtgatgttaaaaaaaaaagaaagaaagaaagacagaagagaAAAAACACCCTCTTTTTCCTTCATCCTCCATTCTTCTTGTCAGCAAGCACTGCTTGCTATGAGGGCTGAATGAATGGAGGAGATATCCAGCCGGTTAGATGCTTAGCAACTAGAAGTTGTAAAGAGGATCAAGAACAGGTTAGACTTTCAAAAAAATGGATCTAGACCTCAGGGAGTGATTAAGTCAATACTTATTAACTTACAAGGCTTAATGCTCAGACTGTGGCTGGGACGCCAACTCAGAGTACATCAGTCCCTCTGCAGAGATGGCGTCCCCCAGCCCGACTGTCCGTAGTGGTCGTTTGCATACTAGTACTGGACTGAGATGGAAGGACACGTTCCTCCTGCTCCACACAGTAACTGGACTGGATGCTTCCAACACCAAGCTCTCTCTAGGCTCTGAAAACGAGCTGTAGAACCTCTGTGGCATCTTCAGCACCACTTTACTTACATCCACAGCCTGTAGACCACACGCCTGACTGCTGGCCACACGTGCCCCAGCCGCTACCGCTGCCCCCTGGTTCGCCCAGTGCCCGTCAACTGTAGCCAGGATGTGGTAGGCCAGCGTGTGGAAGTGGATCCGTGTCAGATCGGCCTCAGACTCCGGGTCAGCCCTCCCGTGCTGCTCCAGGATCCACAGGAGAATGTCACTAACTCGGCCCACGTCGGGGATCCCGTCCCAGGCGGGGAGGTCAGAGTGAGGACCATCTCCGGCTTGGGAGAGAAACAGCAGCTCCTGCTCATTGAGCCCGATGGAGTTGACGATGG

Function

symbol description
adpgk Predicted to enable ADP-specific glucokinase activity. Predicted to be involved in glucose metabolic process. Predicted to act upstream of or within glycolytic process. Predicted to be active in endoplasmic reticulum. Is expressed in brain; heart; liver; muscle; and notochord. Orthologous to human ADPGK (ADP dependent glucokinase).

NR:

description
PREDICTED: ADP-dependent glucokinase isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU103301 True 981 lncRNA 0.49 2 25612125 25615351

Neighbor

gene id symbol gene type direction distance location
LOC103047119 neo1,LOC108275206 coding downstream 50178 25351525 ~ 25561947 (-)
mpi mpi,LOC106560745,LOC106584640 coding downstream 284572 25317126 ~ 25327553 (-)
LOC103023960 kiaa1644,LOC108274641 coding downstream 511025 25013293 ~ 25101100 (-)
LOC107197705 NA coding downstream 662103 24949044 ~ 24950022 (-)
eps8l2 eps8l2 coding downstream 823767 24742769 ~ 24788358 (-)
bbs4 bbs4,LOC107754319,LOC107701057 coding upstream 69 25615420 ~ 25631771 (-)
adck2 adck2,LOC107669038 coding upstream 40414 25655765 ~ 25661625 (-)
mrps35 mrps35 coding upstream 229266 25844617 ~ 25857522 (-)
cdkn1b NA coding upstream 457746 26073097 ~ 26077993 (-)
yars2 yars2 coding upstream 464025 26079376 ~ 26085001 (-)
G76579 NA non-coding downstream 15462 25596425 ~ 25596663 (-)
G76570 NA non-coding downstream 47695 25529824 ~ 25564430 (-)
G76453 NA non-coding downstream 374112 25236454 ~ 25238013 (-)
G76438 NA non-coding downstream 399099 25207830 ~ 25213026 (-)
G76421 NA non-coding downstream 485209 25119923 ~ 25126916 (-)
G76590 NA non-coding upstream 21621 25636972 ~ 25645157 (-)
LOC111193115 NA non-coding upstream 21721 25637072 ~ 25639133 (-)
LOC111193116 NA non-coding upstream 24596 25639947 ~ 25641133 (-)
G76595 NA non-coding upstream 98132 25713483 ~ 25713920 (-)
G76676 NA non-coding upstream 147171 25762522 ~ 25830697 (-)
rab3il1 rab3il1,LOC108429468,LOC107549590 other downstream 310357 25282789 ~ 25301768 (-)
G76424 NA other downstream 427656 25184209 ~ 25184469 (-)
G76377 NA other downstream 691760 24914298 ~ 24920365 (-)
LOC103025724 tmem80 other downstream 813509 24791192 ~ 24798616 (-)
deaf1 deaf1,LOC107726848 other downstream 1351595 24240898 ~ 24260530 (-)
LOC103031319 coro2b,LOC108412540,LOC105018662,LOC107549656,LOC107738688 other upstream 1241278 26856629 ~ 26878862 (-)

Expression


Co-expression Network