G76676


Basic Information

Item Value
gene id G76676
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 25762522 ~ 25830697 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU103428
GCCACACTTGCTTTATTTCATGTCTTTTGTCGAGCTGTTATCTGGCAGATTCAGCTTCCTCAATAATAGAAACAGTGTCAAATCAAAAAGAAGGTTCTGCTGTCAAGTTCTCATCTGCACAGATCCATGTTTATTTCCCAGATTTCTCTGTGCAGTCTCACGTTGGCACAGCTGTGGTTTCTTTGGGTCTCGGATGTGACAGAATTCTTCTTGGAGTGAAAGCATAGCACACTGTTTTTCCTCCAACATTATAAATGATAGTTTATAAGAGTTCATGACAAACTGGAtccaaacagttttttttttcccagtcaGTGTTTTCCAGATCCATTTCTGCAGTTGATCTTCTCTGACCTtttgcattgtcctgttgaTCCAGCTCACATAGgattttagcattagctgaagTTTGGAAACACTGGTCTGTCTTCAGTGTATAAACGGTTTCAGTACTAAATTGTGTTATTGGGTTGTGTTACGTGTGTTGGCTGAAATATAGTCAAATCAATACGATAAAACAACAAATGGAACAAATATAACTTAGGTTTCAGTGTCAAATacccttttttttctccaccatGGAGTCTGAAAATACTGTCGTATAAATCTTTGGTCACCAGGTGACCACCAGTTTTGACACTAACACATGCAGCTGTGTAAAAAGATACTATAACAAACACTCTTgagaaaaaatagattaaagaggatcaagagagagagagagagagagagagagagagagagaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU103428 True 747 lncRNA 0.38 2 25762522 25830697

Neighbor

gene id symbol gene type direction distance location
adck2 adck2,LOC107669038 coding downstream 100897 25655765 ~ 25661625 (-)
bbs4 bbs4,LOC107754319,LOC107701057 coding downstream 130751 25615420 ~ 25631771 (-)
LOC103047119 neo1,LOC108275206 coding downstream 200575 25351525 ~ 25561947 (-)
mpi mpi,LOC106560745,LOC106584640 coding downstream 434969 25317126 ~ 25327553 (-)
LOC103023960 kiaa1644,LOC108274641 coding downstream 661422 25013293 ~ 25101100 (-)
mrps35 mrps35 coding upstream 13920 25844617 ~ 25857522 (-)
cdkn1b NA coding upstream 242400 26073097 ~ 26077993 (-)
yars2 yars2 coding upstream 248679 26079376 ~ 26085001 (-)
LOC103026228 LOC108429453,LOC107558597,LOC107549599,LOC107701195,LOC107668648,LOC105913426 coding upstream 260565 26091262 ~ 26134844 (-)
LOC103029104 fbln1,LOC108429449,LOC108275342 coding upstream 560318 26391015 ~ 26438288 (-)
G76595 NA non-coding downstream 48602 25713483 ~ 25713920 (-)
G76590 NA non-coding downstream 117365 25636972 ~ 25645157 (-)
LOC111193116 NA non-coding downstream 121389 25639947 ~ 25641133 (-)
LOC111193115 NA non-coding downstream 123389 25637072 ~ 25639133 (-)
G76585 adpgk,LOC107549595,LOC107745566,LOC107569355 non-coding downstream 147171 25612125 ~ 25615351 (-)
G76701 NA non-coding upstream 247741 26078438 ~ 26079115 (-)
G76706 NA non-coding upstream 256655 26087352 ~ 26102108 (-)
G76707 NA non-coding upstream 314932 26145629 ~ 26146804 (-)
LOC111193117 NA non-coding upstream 316451 26147148 ~ 26171101 (-)
G76727 NA non-coding upstream 391329 26222026 ~ 26222578 (-)
rab3il1 rab3il1,LOC108429468,LOC107549590 other downstream 460754 25282789 ~ 25301768 (-)
G76424 NA other downstream 578053 25184209 ~ 25184469 (-)
G76377 NA other downstream 842157 24914298 ~ 24920365 (-)
LOC103025724 tmem80 other downstream 963906 24791192 ~ 24798616 (-)
deaf1 deaf1,LOC107726848 other downstream 1501992 24240898 ~ 24260530 (-)
LOC103031319 coro2b,LOC108412540,LOC105018662,LOC107549656,LOC107738688 other upstream 1025932 26856629 ~ 26878862 (-)

Expression


Co-expression Network