G76727


Basic Information

Item Value
gene id G76727
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 26222026 ~ 26222578 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU103483
cactttgtctccgtcggtctttgcaccttcccctgttgttttgtctctctgttgtttcaCCGCGTTTCATAGCCCaagtccttgctctgtgtttacctctgtttatcTCGTGTATATTTCtggtttcctgtttatttccattgttttctcctttgccctgcttagtttagttctccttgtctagtttagtttcttgtttagctctaTGTTCCCTGTATATAACCTTAGTcatttgtttctcgtttatttcttgttttcacgtttatagtttatttccttatttattttctagtttatttcccatatatatatatatattccctgtttgtttattattatcatcgctcgtttgttattggttatttgtgtttctttgtttcatgtttacttgttcctcgtttccttgtttctttgttatttatttaataaattatttatttatttcgcccttacctgcacttgtgtccgctttcctcgtcaccctgcctgggtcacccccATTTCCGTGACAA
>TU103484
cactttgtctccgtcggtctttgcaccttcccctgttgttttgtctctctgttgtttcaCCGCGTTTCATAGCCCaagtccttgctctgtgtttacctctgtttatcTCGTGTATATTTCtggtttcctgtttatttccattgttttctcctttgccctgcttagtttagttctccttgtctagtttagtttcttgtttagctctaTGTTCCCTGTATATAACCTTAGTcatttgtttctcgtttatttcttgttttcacgtttatagtttatttccttatttattttctagtttatttcccatatatatatatattccctgtttgtttattattatcatcgctcgtttgttattggttatttgtgtttctttgtttcatgtttacttgttcctcgtttccttgtttctttgttatttatttaataaattatttatttatttcgcccttacctgcacttgtgtccgctttcctcgtcaccctgcctgggtcacccccATTTCCGTGACAA
>TU103485
cactttgtctccgtcggtctttgcaccttcccctgttgttttgtctctctgttgtttcaCCGCGTTTCATAGCCCaagtccttgctctgtgtttacctctgtttatcTCGTGTATATTTCtggtttcctgtttatttccattgttttctcctttgccctgcttagtttagttctccttgtctagtttagtttcttgtttagctctaTGTTCCCTGTATATAACCTTAGTcatttgtttctcgtttatttcttgttttcacgtttatagtttatttccttatttattttctagtttatttcccatatatatatatatatattccctgtttgtttattattatcatcgctcgtttgttattggttatttgtgtttctttgtttcatgtttacttgttcctcgtttccttgtttctttgttatttatttaataaattatttatttatttcgcccttacctgcacttgtgtccgctttcctcgtcaccctgcctgggtcacccccATTTCCGTGACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU103483 False 512 lncRNA 0.36 2 26222026 26222578
TU103484 False 510 lncRNA 0.36 2 26222026 26222578
TU103485 True 514 lncRNA 0.36 2 26222026 26222578

Neighbor

gene id symbol gene type direction distance location
LOC103026228 LOC108429453,LOC107558597,LOC107549599,LOC107701195,LOC107668648,LOC105913426 coding downstream 87182 26091262 ~ 26134844 (-)
yars2 yars2 coding downstream 137025 26079376 ~ 26085001 (-)
cdkn1b NA coding downstream 144033 26073097 ~ 26077993 (-)
mrps35 mrps35 coding downstream 364504 25844617 ~ 25857522 (-)
adck2 adck2,LOC107669038 coding downstream 560401 25655765 ~ 25661625 (-)
LOC103029104 fbln1,LOC108429449,LOC108275342 coding upstream 168437 26391015 ~ 26438288 (-)
LOC103035555 ppm1h,LOC108429443 coding upstream 466876 26689454 ~ 26716315 (-)
avpr1a avpr1a,avpr1ab,LOC107592260,LOC107725953 coding upstream 543515 26766093 ~ 26774390 (-)
fem1b fem1b,LOC107680899,LOC107575886,LOC107738637 coding upstream 735392 26957970 ~ 26966063 (-)
LOC103035861 LOC108429396 coding upstream 779650 27002228 ~ 27003545 (-)
LOC111193117 NA non-coding downstream 50925 26147148 ~ 26171101 (-)
G76707 NA non-coding downstream 75222 26145629 ~ 26146804 (-)
G76706 NA non-coding downstream 119918 26087352 ~ 26102108 (-)
G76701 NA non-coding downstream 142911 26078438 ~ 26079115 (-)
G76676 NA non-coding downstream 391329 25762522 ~ 25830697 (-)
G76744 NA non-coding upstream 111815 26334393 ~ 26334651 (-)
G76771 NA non-coding upstream 179035 26401613 ~ 26402605 (-)
G76802 NA non-coding upstream 276335 26498913 ~ 26513894 (-)
G76837 NA non-coding upstream 450419 26672997 ~ 26673388 (-)
G76851 NA non-coding upstream 506710 26729288 ~ 26729656 (-)
rab3il1 rab3il1,LOC108429468,LOC107549590 other downstream 920258 25282789 ~ 25301768 (-)
G76424 NA other downstream 1037557 25184209 ~ 25184469 (-)
G76377 NA other downstream 1301661 24914298 ~ 24920365 (-)
LOC103025724 tmem80 other downstream 1423410 24791192 ~ 24798616 (-)
deaf1 deaf1,LOC107726848 other downstream 1961496 24240898 ~ 24260530 (-)
LOC103031319 coro2b,LOC108412540,LOC105018662,LOC107549656,LOC107738688 other upstream 634051 26856629 ~ 26878862 (-)

Expression


Co-expression Network