CI01000009_03599584_03602070 (ASMTL)


Basic Information

Item Value
gene id CI01000009_03599584_03602070
gene name ASMTL
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 3599349 ~ 3602070 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_03599584_03602070.mRNA
ATGGCATACGAGTTTACAAAAGCCCACCCCGGACTGTCAGTTATTGTATTTGACTTGCCACAAGTCATTGAGATGAGACGTCACTTTAAACCTAAAGAAGATGATGACAGAGTGTCATTTGTTGCGGGAGATTTTTTTAAAGATGACCTGCCTAAAGCTGACCTGTATATTCTTGCGCGAATCCTCCATGACTGGTCGGATGAGAAACTGCATGTATTGTTGAGTAAACTGTCCAAAATGTGCACACCAGGTTGTGGACTTCTGGTGTCTGAGATCTTCCTGGACGATGAGCGGAAAAGGCCAAGTCGAGCCCTTCTGCAGGCCCTGAGTATGACAGAAGGAAAGCAGAGGAGCACCACAGAATACAGTGACTTACTAGAGAAGCATGGCTTCACTCTCAAACATATCAAACACACAGACAACCTGCTGGATGCCATGCTATTTGTCAAAGAAGATCCAAATGACAAATGAACATTACTAGGCTGTTCTTCAGCATCCATTGAGACCGCAGAACTTGGGTGATATAAAGACTACAGCGTCTGAATCGGAAACACTACAGTTATTCTAGTTCATGAACTGTAATTTTTTTTTTTAAGCTGTGTTCAAATACTATGAATGTTTCTGTTTCTCAAAATAAGTATTTTTACATGATTATTATTAATTACGGAGAAAGTTTTAAACTGGTAATGTTGTAAACTGAAATAAA

Function

symbol description
asmtl Predicted to enable nucleoside-triphosphate diphosphatase activity. Predicted to act upstream of or within methylation. Orthologous to human ASMTL (acetylserotonin O-methyltransferase like).

NR:

description
hydroxyindole-O-methyltransferase 2

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_03599584_03602070.mRNA True 706 mRNA 0.40 3 3599349 3602070

Neighbor

gene id symbol gene type direction distance location
CI01000009_03591700_03598877 SLC25A6, SLC25A5 coding downstream 472 3591428 ~ 3598877 (-)
CI01000009_03582190_03582916 NA coding downstream 15904 3582190 ~ 3583445 (-)
CI01000009_03568782_03574843 NA coding downstream 24506 3568655 ~ 3574843 (-)
CI01000009_03378591_03380390 NA coding downstream 217984 3378559 ~ 3381365 (-)
CI01000009_03358707_03369503 PPP2R3B coding downstream 229772 3358008 ~ 3369577 (-)
CI01000009_03614390_03616151 P2RY8 coding upstream 11721 3613791 ~ 3616619 (-)
CI01000009_03622269_03631417 UPF3A coding upstream 19867 3621937 ~ 3631417 (-)
CI01000009_03633868_03640910 CDC16 coding upstream 31634 3633704 ~ 3640910 (-)
CI01000009_03643048_03645741 DCNL2, DCUN1D2, DCUN1D2A coding upstream 40178 3642248 ~ 3647160 (-)
CI01000009_03664045_03666052 NA coding upstream 61877 3663947 ~ 3666737 (-)
G52670 NA non-coding downstream 144799 3454343 ~ 3454550 (-)
G52639 NA non-coding downstream 192473 3406663 ~ 3406876 (-)
G52623 NA non-coding downstream 213289 3381984 ~ 3386060 (-)
G52606 NA non-coding downstream 296688 3300949 ~ 3302661 (-)
G52501 NA non-coding downstream 308526 3287318 ~ 3290823 (-)
G52725 NA non-coding upstream 45644 3647714 ~ 3647979 (-)
G52735 NA non-coding upstream 128830 3730900 ~ 3731251 (-)
G52736 NA non-coding upstream 129243 3731313 ~ 3731533 (-)
G52739 NA non-coding upstream 133753 3735823 ~ 3736139 (-)
G52743 NA non-coding upstream 141257 3743327 ~ 3743553 (-)
CI01000009_03261739_03262843 NA other downstream 337392 3261038 ~ 3262843 (-)
CI01000009_02885473_02893975 NA other downstream 699942 2883688 ~ 2893975 (-)
G52410 NA other downstream 1036816 2551724 ~ 2562533 (-)
G52098 NA other downstream 2191722 1401932 ~ 1407627 (-)
G52828 NA other upstream 615350 4217420 ~ 4231469 (-)
G53515 NA other upstream 1900325 5502395 ~ 5505248 (-)
G55814 NA other upstream 4823751 8425821 ~ 8428012 (-)
CI01000009_08858198_08860555 NA other upstream 5256082 8856310 ~ 8860563 (-)
G59097 NA other upstream 8686147 12288217 ~ 12289518 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location