Gene
RNA
| Item | Value |
|---|---|
| gene id | G70438 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035904.1 |
| NCBI id | CM008307.1 |
| chromosome length | 27092187 |
| location | 704017 ~ 704490 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| description |
|---|
| PREDICTED: TBC1 domain family member 4-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU95042 | True | 223 | lncRNA | 0.48 | 2 | 704017 | 704490 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC103044579 | NA | coding | downstream | 507734 | 178319 ~ 196283 (-) |
| LOC111193040 | NA | coding | upstream | 227527 | 932017 ~ 938184 (-) |
| rps5 | rps5 | coding | upstream | 270605 | 975095 ~ 982603 (-) |
| LOC103041113 | ppt2 | coding | upstream | 283956 | 988446 ~ 1005877 (-) |
| LOC103026956 | ctnna1 | coding | upstream | 1293666 | 1998156 ~ 2220364 (-) |
| LOC103026657 | tspan17,LOC108436843,LOC107749748,LOC107680656 | coding | upstream | 1731190 | 2435680 ~ 2488996 (-) |
| G70335 | NA | non-coding | downstream | 144940 | 555237 ~ 559077 (-) |
| G70329 | NA | non-coding | downstream | 211414 | 492401 ~ 492603 (-) |
| LOC111193066 | NA | non-coding | downstream | 258488 | 436237 ~ 445529 (-) |
| G70317 | NA | non-coding | downstream | 283283 | 420453 ~ 420734 (-) |
| G70316 | NA | non-coding | downstream | 292191 | 411585 ~ 411826 (-) |
| G70450 | NA | non-coding | upstream | 74872 | 779362 ~ 780175 (-) |
| G70443 | NA | non-coding | upstream | 75837 | 780327 ~ 781693 (-) |
| G70454 | NA | non-coding | upstream | 122423 | 826913 ~ 828556 (-) |
| G70455 | NA | non-coding | upstream | 131739 | 836229 ~ 840154 (-) |
| G70457 | NA | non-coding | upstream | 140548 | 845038 ~ 853605 (-) |
| LOC103042850 | cratb,LOC108435838,LOC108274804,LOC107561339,LOC107758403,LOC105903715,LOC107563340,LOC107679039 | other | upstream | 305396 | 1009886 ~ 1035016 (-) |
| tnip1 | tnip1,LOC107594924,LOC107750363 | other | upstream | 1999705 | 2704195 ~ 2745072 (-) |
| G70924 | ndufb9 | other | upstream | 2575666 | 3280156 ~ 3353599 (-) |
| LOC111193045 | LOC108442482,LOC102793828 | other | upstream | 2739605 | 3444095 ~ 3458810 (-) |
| LOC103023864 | NA | other | upstream | 2871071 | 3575561 ~ 3703751 (-) |
