G70574


Basic Information

Item Value
gene id G70574
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 2184594 ~ 2185975 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU95208
ctggagcagcaatagcattagctagatgctaaccgctaagctagctagcttattcactgagatcagtattatctaaattttactcgtcaggttgtaaggagcagtaaacacacactccgtgcagcgttatacagagtttcagtgctatacagagtccagagccgtgcagctccgaggctggagcagcaaatagcattagctagcttattcactgttcagagatcagtattatctaaattttacccgtcaggtgtaaggagcagtaaacacacactccgtgcagagcagcaatagcattagctagatgctaaccgcttagctagctagctttttcactgttcagagatcagtattttctaaatttagcacttttaatactgctggagcagtattattagagttagatgctaatcgctaagcgttcaccgttcagaggtgagttatcggcctgtaagtctgtgctgctttgcctggctagcattagctagatgctaagcgctaactctctcagaggtgagttttatcagcctgtaatctgcttgtttaccgtgttaaaacaagctacgggggacgaatcgctagctaatatctcactgtcttaccagaacacgcaggattactcagtgtaacgctgtcgtttaagtttgggttaactttactagtttaggtgactagctagcgtgctagcggatagctatgctaacgctggtgcagcaagccttagtggacatctggaaatctaagcttactgtaaataaactgaagcacgttactcacccaaataaacagttttcaggagaggaatctgtgtagattaatatccagcactcgtttgactttgaaatagctagatttatatatactgagacgctccaccggcaagcgaccacccccggtgggggaagggaaacatggcgccacccctgttcactttgatataggcaccctttctagtgtcacttaacgcgccttataatgcgatgcgccctatgtatggaaaaatagcagaaaataggcgttctttgatagtgcgtcttataatacgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95208 True 1046 lncRNA 0.44 2 2184594 2185975

Neighbor

gene id symbol gene type direction distance location
LOC103041113 ppt2 coding downstream 1178717 988446 ~ 1005877 (-)
rps5 rps5 coding downstream 1201991 975095 ~ 982603 (-)
LOC111193040 NA coding downstream 1246410 932017 ~ 938184 (-)
LOC103044579 NA coding downstream 1988311 178319 ~ 196283 (-)
LOC103026657 tspan17,LOC108436843,LOC107749748,LOC107680656 coding upstream 249705 2435680 ~ 2488996 (-)
LOC103022920 NA coding upstream 315013 2500988 ~ 2535981 (-)
dctn4 dctn4,LOC107749746 coding upstream 475536 2661511 ~ 2678905 (-)
anxa6 anxa6,LOC107750364,LOC107594885 coding upstream 578170 2764145 ~ 2816535 (-)
rmnd5b rmnd5b,LOC105026275,LOC100306854,LOC106612137 coding upstream 772674 2958649 ~ 2982646 (-)
G70572 NA non-coding downstream 86626 2054736 ~ 2097968 (-)
G70528 NA non-coding downstream 886565 1297709 ~ 1298029 (-)
G70526 NA non-coding downstream 895474 1288873 ~ 1289120 (-)
G70521 NA non-coding downstream 916152 1267968 ~ 1268442 (-)
G70515 NA non-coding downstream 1020124 1164203 ~ 1164470 (-)
G70578 NA non-coding upstream 44516 2230491 ~ 2230944 (-)
G70579 NA non-coding upstream 51324 2237299 ~ 2237515 (-)
G70597 NA non-coding upstream 125310 2311285 ~ 2346852 (-)
G70598 NA non-coding upstream 127821 2313796 ~ 2322706 (-)
G70602 NA non-coding upstream 145321 2331296 ~ 2346826 (-)
LOC103042850 cratb,LOC108435838,LOC108274804,LOC107561339,LOC107758403,LOC105903715,LOC107563340,LOC107679039 other downstream 1149578 1009886 ~ 1035016 (-)
tnip1 tnip1,LOC107594924,LOC107750363 other upstream 518220 2704195 ~ 2745072 (-)
G70924 ndufb9 other upstream 1094181 3280156 ~ 3353599 (-)
LOC111193045 LOC108442482,LOC102793828 other upstream 1258120 3444095 ~ 3458810 (-)
LOC103023864 NA other upstream 1389586 3575561 ~ 3703751 (-)
LOC103042226 LOC108274609,LOC107701883,LOC100536156,LOC107747745,LOC107574915,LOC108442488 other upstream 1550651 3736626 ~ 3848624 (-)

Expression


Co-expression Network