G70583


Basic Information

Item Value
gene id G70583
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 2270880 ~ 2271131 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU95217
TGTCACACGGGAgacggagggatggacgtaagtgcaataattactttattaaacaaacaagataaaataaaacaaacaaaacgcgggtaacgcaaaaaacatacaaaaaaaacaaggctaGGATAAATATAAACTGAGAAACACTGACTAACGAAACTAAGATGCGAGGATACAAGAAACACAGAACTAAGAAACTAAGACTAGGATACAAACGGACTGCAGGGATACAAAGATACGAAGGATACagcatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95217 True 252 lncRNA 0.37 1 2270880 2271131

Neighbor

gene id symbol gene type direction distance location
LOC103041625 ddah2,LOC108435833,LOC107660989,LOC106570066 coding upstream 1298037 957420 ~ 972843 (+)
LOC103041930 clic1,LOC108274855,LOC107660990,LOC107753388,LOC107708731,LOC107679037,LOC107564667 coding upstream 1358358 899894 ~ 912522 (+)
LOC103042240 LOC103042240 coding upstream 1393476 867909 ~ 877404 (+)
LOC103036550 NA coding upstream 1492874 640691 ~ 778006 (+)
LOC111193065 NA coding upstream 1860658 404610 ~ 410222 (+)
gpx3 LOC108415088 coding downstream 419607 2690738 ~ 2701134 (+)
LOC103025734 LOC108439812,LOC108275395,LOC105903016,LOC107749739,LOC107653313,LOC107594883 coding downstream 557278 2828409 ~ 2854104 (+)
LOC103021672 LOC108439811,LOC107749774,LOC107653301,LOC107594902 coding downstream 586764 2857895 ~ 2866216 (+)
LOC103025421 n4bp3 coding downstream 600445 2871576 ~ 2946729 (+)
LOC103047122 LOC108439803 coding downstream 787393 3058524 ~ 3081939 (+)
G70580 NA non-coding upstream 32783 2237717 ~ 2238097 (+)
G70577 NA non-coding upstream 39935 2230475 ~ 2230945 (+)
G70575 NA non-coding upstream 46727 2223800 ~ 2224153 (+)
G70532 ctnna1 non-coding upstream 193577 1998119 ~ 2077303 (+)
G70533 NA non-coding upstream 255976 2011528 ~ 2014904 (+)
G70587 NA non-coding downstream 3297 2274428 ~ 2274856 (+)
G70588 NA non-coding downstream 28458 2299589 ~ 2299922 (+)
G70589 NA non-coding downstream 29672 2300803 ~ 2314866 (+)
G70595 NA non-coding downstream 72228 2343359 ~ 2355896 (+)
G70606 NA non-coding downstream 110125 2381256 ~ 2384149 (+)
lrrtm2 lrrtm2,LOC107680618,LOC107750357,LOC103471148 other upstream 77321 2088920 ~ 2193559 (+)
G70522 NA other upstream 1001476 1268767 ~ 1269404 (+)
G70385 NA other upstream 1265042 1005483 ~ 1005838 (+)
LOC111193067 NA other upstream 1415722 845025 ~ 855158 (+)
LOC103042548 NA other upstream 1430666 794712 ~ 840214 (+)
G70604 LOC108436838 other downstream 87752 2358883 ~ 2359229 (+)
LOC103024487 syngap1a,LOC108275193,LOC108439800 other downstream 850787 3121918 ~ 3292475 (+)
G70846 NA other downstream 1106553 3377684 ~ 3378610 (+)
LOC111193071 NA other downstream 1138539 3409670 ~ 3574758 (+)
LOC103028288 LOC108435610,LOC108275213,LOC106520856 other downstream 2085934 4357065 ~ 4441931 (+)

Expression


Co-expression Network