G70595


Basic Information

Item Value
gene id G70595
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 2343359 ~ 2355896 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU95235
ccccgtttttctgtgctagaaatgcgcaccctctccgcttttagactctttgctccgtttttttgcgctagaaatgcgcaccctctccacttttagactctttgctccgtttttctgcgctagaaatgcgcaccctctccacttttagactctttggcccgtttttctgtgctagaaatgcgcactctctccgcttttagactctttggcccgtttttctgtgctagaaatgcgcactctctccgcttttagactctttggcccgtttttctgtgctagaaatgcgcaccctctccgcttttagactcttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95235 True 311 lncRNA 0.48 2 2343359 2355896

Neighbor

gene id symbol gene type direction distance location
LOC103041625 ddah2,LOC108435833,LOC107660989,LOC106570066 coding upstream 1370516 957420 ~ 972843 (+)
LOC103041930 clic1,LOC108274855,LOC107660990,LOC107753388,LOC107708731,LOC107679037,LOC107564667 coding upstream 1430837 899894 ~ 912522 (+)
LOC103042240 LOC103042240 coding upstream 1465955 867909 ~ 877404 (+)
LOC103036550 NA coding upstream 1565353 640691 ~ 778006 (+)
LOC111193065 NA coding upstream 1933137 404610 ~ 410222 (+)
gpx3 LOC108415088 coding downstream 334842 2690738 ~ 2701134 (+)
LOC103025734 LOC108439812,LOC108275395,LOC105903016,LOC107749739,LOC107653313,LOC107594883 coding downstream 472513 2828409 ~ 2854104 (+)
LOC103021672 LOC108439811,LOC107749774,LOC107653301,LOC107594902 coding downstream 501999 2857895 ~ 2866216 (+)
LOC103025421 n4bp3 coding downstream 515680 2871576 ~ 2946729 (+)
LOC103047122 LOC108439803 coding downstream 702628 3058524 ~ 3081939 (+)
G70589 NA non-coding upstream 28493 2300803 ~ 2314866 (+)
G70588 NA non-coding upstream 43437 2299589 ~ 2299922 (+)
G70587 NA non-coding upstream 68503 2274428 ~ 2274856 (+)
G70583 NA non-coding upstream 72228 2270880 ~ 2271131 (+)
G70580 NA non-coding upstream 105262 2237717 ~ 2238097 (+)
G70606 NA non-coding downstream 25360 2381256 ~ 2384149 (+)
G70611 NA non-coding downstream 47518 2403414 ~ 2403932 (+)
G70608 NA non-coding downstream 79083 2434979 ~ 2436078 (+)
G70618 NA non-coding downstream 142753 2498649 ~ 2504305 (+)
G70623 NA non-coding downstream 179570 2535466 ~ 2537335 (+)
lrrtm2 lrrtm2,LOC107680618,LOC107750357,LOC103471148 other upstream 149800 2088920 ~ 2193559 (+)
G70522 NA other upstream 1073955 1268767 ~ 1269404 (+)
G70385 NA other upstream 1337521 1005483 ~ 1005838 (+)
LOC111193067 NA other upstream 1488201 845025 ~ 855158 (+)
LOC103042548 NA other upstream 1503145 794712 ~ 840214 (+)
G70604 LOC108436838 other downstream 2987 2358883 ~ 2359229 (+)
LOC103024487 syngap1a,LOC108275193,LOC108439800 other downstream 766022 3121918 ~ 3292475 (+)
G70846 NA other downstream 1021788 3377684 ~ 3378610 (+)
LOC111193071 NA other downstream 1053774 3409670 ~ 3574758 (+)
LOC103028288 LOC108435610,LOC108275213,LOC106520856 other downstream 2001169 4357065 ~ 4441931 (+)

Expression


Co-expression Network