G70597


Basic Information

Item Value
gene id G70597
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 2311285 ~ 2346852 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU95238
attaaagctccactaggtaggattgagattttgtgctcgtgggctccccctacagttgtagagtgtaataaatgtttcaggtggattagtttctctttctcattttctggcttttacagacatattcggtctcttcccatcttctgccagagtgtctgtatgttagtttgtaaagaatgaaccagtagtccttatAGCACTGTTAGAagtaaaggtcggaaagcaggtcgcagttctcacgagagttggtcgcggccgcctcggaaaacttacagagtc

Function

GO:

id name namespace
GO:0048731 system development biological_process
GO:0043009 chordate embryonic development biological_process
GO:0007275 multicellular organism development biological_process
GO:0009888 tissue development biological_process
GO:0048856 anatomical structure development biological_process
GO:0009952 anterior/posterior pattern specification biological_process
GO:0003002 regionalization biological_process
GO:0007389 pattern specification process biological_process
GO:0032501 multicellular organismal process biological_process
GO:0032502 developmental process biological_process
GO:0009790 embryo development biological_process
GO:0009792 embryo development ending in birth or egg hatching biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95238 True 279 lncRNA 0.44 2 2311285 2346852

Neighbor

gene id symbol gene type direction distance location
LOC103026956 ctnna1 coding downstream 90921 1998156 ~ 2220364 (-)
LOC103041113 ppt2 coding downstream 1305408 988446 ~ 1005877 (-)
rps5 rps5 coding downstream 1328682 975095 ~ 982603 (-)
LOC111193040 NA coding downstream 1373101 932017 ~ 938184 (-)
LOC103044579 NA coding downstream 2115002 178319 ~ 196283 (-)
LOC103026657 tspan17,LOC108436843,LOC107749748,LOC107680656 coding upstream 88828 2435680 ~ 2488996 (-)
LOC103022920 NA coding upstream 154136 2500988 ~ 2535981 (-)
dctn4 dctn4,LOC107749746 coding upstream 314659 2661511 ~ 2678905 (-)
anxa6 anxa6,LOC107750364,LOC107594885 coding upstream 417293 2764145 ~ 2816535 (-)
rmnd5b rmnd5b,LOC105026275,LOC100306854,LOC106612137 coding upstream 611797 2958649 ~ 2982646 (-)
G70579 NA non-coding downstream 73770 2237299 ~ 2237515 (-)
G70578 NA non-coding downstream 80341 2230491 ~ 2230944 (-)
G70574 NA non-coding downstream 125310 2184594 ~ 2185975 (-)
G70572 NA non-coding downstream 213317 2054736 ~ 2097968 (-)
G70528 NA non-coding downstream 1013256 1297709 ~ 1298029 (-)
G70605 LOC108436838 non-coding upstream 11959 2358811 ~ 2359229 (-)
G70624 NA non-coding upstream 34465 2381317 ~ 2384167 (-)
G70628 NA non-coding upstream 56559 2403411 ~ 2403865 (-)
G70629 NA non-coding upstream 72707 2419559 ~ 2434902 (-)
G70632 NA non-coding upstream 77184 2424036 ~ 2455464 (-)
LOC103042850 cratb,LOC108435838,LOC108274804,LOC107561339,LOC107758403,LOC105903715,LOC107563340,LOC107679039 other downstream 1276269 1009886 ~ 1035016 (-)
tnip1 tnip1,LOC107594924,LOC107750363 other upstream 357343 2704195 ~ 2745072 (-)
G70924 ndufb9 other upstream 933304 3280156 ~ 3353599 (-)
LOC111193045 LOC108442482,LOC102793828 other upstream 1097243 3444095 ~ 3458810 (-)
LOC103023864 NA other upstream 1228709 3575561 ~ 3703751 (-)
LOC103042226 LOC108274609,LOC107701883,LOC100536156,LOC107747745,LOC107574915,LOC108442488 other upstream 1389774 3736626 ~ 3848624 (-)

Expression


Co-expression Network