G70604 (LOC108436838)


Basic Information

Item Value
gene id G70604
gene name LOC108436838
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 2358883 ~ 2359229 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU95246
AGCGCACTGAGAGGAACAGCAGTGTAGCGGATTGTAAAGTATGCTCGGTAACCGGAGTCGCTGGGGAGAGTCGCGCGGTTCCGCTGTGTTCTGATAGCCGGTTATAGAGCAGGATGAACGGGTCGGACGGGCTGTGCGGGTCCGGGGAGGTTCTGGTGAACGGCTCGCTGTGTGTGAACCGGACCGGCTCCGCGGTCAGCCCGATAGACGCCGCGTCCTTCATGCACATCTTCCCCACGGTGTACGGCGTGCTGTGCTCCGTGGGCGTGCTCGCCAACAGCCTGGTGATCTACGCCGTGGCCACCTGTAAGAAGAAGATGGTGTCGGATATCTACGTGCTGAACCTG

Function

NR:

description
PREDICTED: melanin-concentrating hormone receptor 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95246 True 347 TUCP 0.61 1 2358883 2359229

Neighbor

gene id symbol gene type direction distance location
LOC103041625 ddah2,LOC108435833,LOC107660989,LOC106570066 coding upstream 1386040 957420 ~ 972843 (+)
LOC103041930 clic1,LOC108274855,LOC107660990,LOC107753388,LOC107708731,LOC107679037,LOC107564667 coding upstream 1446361 899894 ~ 912522 (+)
LOC103042240 LOC103042240 coding upstream 1481479 867909 ~ 877404 (+)
LOC103036550 NA coding upstream 1580877 640691 ~ 778006 (+)
LOC111193065 NA coding upstream 1948661 404610 ~ 410222 (+)
gpx3 LOC108415088 coding downstream 331509 2690738 ~ 2701134 (+)
LOC103025734 LOC108439812,LOC108275395,LOC105903016,LOC107749739,LOC107653313,LOC107594883 coding downstream 469180 2828409 ~ 2854104 (+)
LOC103021672 LOC108439811,LOC107749774,LOC107653301,LOC107594902 coding downstream 498666 2857895 ~ 2866216 (+)
LOC103025421 n4bp3 coding downstream 512347 2871576 ~ 2946729 (+)
LOC103047122 LOC108439803 coding downstream 699295 3058524 ~ 3081939 (+)
G70595 NA non-coding upstream 2987 2343359 ~ 2355896 (+)
G70589 NA non-coding upstream 44017 2300803 ~ 2314866 (+)
G70588 NA non-coding upstream 58961 2299589 ~ 2299922 (+)
G70587 NA non-coding upstream 84027 2274428 ~ 2274856 (+)
G70583 NA non-coding upstream 87752 2270880 ~ 2271131 (+)
G70606 NA non-coding downstream 22027 2381256 ~ 2384149 (+)
G70611 NA non-coding downstream 44185 2403414 ~ 2403932 (+)
G70608 NA non-coding downstream 75750 2434979 ~ 2436078 (+)
G70618 NA non-coding downstream 139420 2498649 ~ 2504305 (+)
G70623 NA non-coding downstream 176237 2535466 ~ 2537335 (+)
lrrtm2 lrrtm2,LOC107680618,LOC107750357,LOC103471148 other upstream 165324 2088920 ~ 2193559 (+)
G70522 NA other upstream 1089479 1268767 ~ 1269404 (+)
G70385 NA other upstream 1353045 1005483 ~ 1005838 (+)
LOC111193067 NA other upstream 1503725 845025 ~ 855158 (+)
LOC103042548 NA other upstream 1518669 794712 ~ 840214 (+)
LOC103024487 syngap1a,LOC108275193,LOC108439800 other downstream 762689 3121918 ~ 3292475 (+)
G70846 NA other downstream 1018455 3377684 ~ 3378610 (+)
LOC111193071 NA other downstream 1050441 3409670 ~ 3574758 (+)
LOC103028288 LOC108435610,LOC108275213,LOC106520856 other downstream 1997836 4357065 ~ 4441931 (+)
atpif1 atpif1,LOC105912502,LOC107571275,LOC104922170,LOC107730904,LOC103378180 other downstream 2556584 4915813 ~ 4921820 (+)

Expression


Co-expression Network