G70606


Basic Information

Item Value
gene id G70606
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 2381256 ~ 2384149 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU95248
caatataagaaataaatgtgtgttcatgtgtaatacatctaaacaatatatgagtttcacgtgttttattgaattactgGAATAAAGTAAATTCTCAATTATATCCCTATATTTTGTTCTGTTCCATGTTTGATCTCGTCCCAATCTCACTGTTGCCGCATCCATATCCCTGCTCAACCAATTAGCGTTGGCTTGCctaaacagcgaaagagctagtgctgttgttagcggctaatgctaatgctgctgcacccagccttagtgctggagaaactttactaaaactcaTCCTGATAATGcagcacttcagtggagtggcttttctgctccttacaacctgactggtagaattcatacataagttaagtagttgcttctcataatctggattagaacattactcaaatattcactattcactgtatacctgtaactctacctcttcactactttactttaactgatgctctcaaacacttttttctaagcaagaggtgtctACTTTGGTTtattcttcatagtttgggtgactttagcattaatctacaaagcaaaacctttttaaaataaagaaaaagcactAAATTAAAAGTCTATCCAAATATTTGACTGGTATTAATTGATAAGCccaaTTACAACACCCATCTGTAGTGATATGCCATCTCTTGTGTTGACCAGGTTTGTGGCCTAATCTAAAGTGCTggatttgtgtgttttgtgtttgtatatgaTGTAACTGTGGTTCATGTGTATCTGATGATGTGCTGCCCGGTTGCAGAaagatttcaccccttccccttataactctgttccAAAGTGAAGGGTTAAACTTGAAatcaaggggtaggggtaagtagtgaaatgggattgggcctaaaaaaTCACTGAAACCTAAATATTCTACCATGACATTTACATTCATGATGGAGGTAAATGTTTTTACAATGGTGATTTAGAAGAAGTGCTCGTGGCAGTGGTGCACGAGTGGTGAGCCATGCACTGACCACAGGTCTGCCCGCTGAAACGACCGGAGAGCTTGTTTTATGGCTCTTGTGCACAAGATGTGTGTTTTGGCCAGAGAGGAGGTCATTTGACTCGGGTTTGTTTATGTAATGCTGTTATCTCACTAACTGTTTCAGTAATATGTGGAGGAGAACTGTGGCCGTTCTGTGTTGTGAAACAGGACCCTGAGTTTTAGAACTGCACTCACTGTAAAACGTTCTATACAATTAAACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95248 True 1237 lncRNA 0.39 3 2381256 2384149

Neighbor

gene id symbol gene type direction distance location
LOC103041625 ddah2,LOC108435833,LOC107660989,LOC106570066 coding upstream 1408413 957420 ~ 972843 (+)
LOC103041930 clic1,LOC108274855,LOC107660990,LOC107753388,LOC107708731,LOC107679037,LOC107564667 coding upstream 1468734 899894 ~ 912522 (+)
LOC103042240 LOC103042240 coding upstream 1503852 867909 ~ 877404 (+)
LOC103036550 NA coding upstream 1603250 640691 ~ 778006 (+)
LOC111193065 NA coding upstream 1971034 404610 ~ 410222 (+)
gpx3 LOC108415088 coding downstream 306589 2690738 ~ 2701134 (+)
LOC103025734 LOC108439812,LOC108275395,LOC105903016,LOC107749739,LOC107653313,LOC107594883 coding downstream 444260 2828409 ~ 2854104 (+)
LOC103021672 LOC108439811,LOC107749774,LOC107653301,LOC107594902 coding downstream 473746 2857895 ~ 2866216 (+)
LOC103025421 n4bp3 coding downstream 487427 2871576 ~ 2946729 (+)
LOC103047122 LOC108439803 coding downstream 674375 3058524 ~ 3081939 (+)
G70595 NA non-coding upstream 25360 2343359 ~ 2355896 (+)
G70589 NA non-coding upstream 66390 2300803 ~ 2314866 (+)
G70588 NA non-coding upstream 81334 2299589 ~ 2299922 (+)
G70587 NA non-coding upstream 106400 2274428 ~ 2274856 (+)
G70583 NA non-coding upstream 110125 2270880 ~ 2271131 (+)
G70611 NA non-coding downstream 19265 2403414 ~ 2403932 (+)
G70608 NA non-coding downstream 50830 2434979 ~ 2436078 (+)
G70618 NA non-coding downstream 114500 2498649 ~ 2504305 (+)
G70623 NA non-coding downstream 151317 2535466 ~ 2537335 (+)
G70642 NA non-coding downstream 242013 2626162 ~ 2662604 (+)
G70604 LOC108436838 other upstream 22027 2358883 ~ 2359229 (+)
lrrtm2 lrrtm2,LOC107680618,LOC107750357,LOC103471148 other upstream 187697 2088920 ~ 2193559 (+)
G70522 NA other upstream 1111852 1268767 ~ 1269404 (+)
G70385 NA other upstream 1375418 1005483 ~ 1005838 (+)
LOC111193067 NA other upstream 1526098 845025 ~ 855158 (+)
LOC103024487 syngap1a,LOC108275193,LOC108439800 other downstream 737769 3121918 ~ 3292475 (+)
G70846 NA other downstream 993535 3377684 ~ 3378610 (+)
LOC111193071 NA other downstream 1025521 3409670 ~ 3574758 (+)
LOC103028288 LOC108435610,LOC108275213,LOC106520856 other downstream 1972916 4357065 ~ 4441931 (+)
atpif1 atpif1,LOC105912502,LOC107571275,LOC104922170,LOC107730904,LOC103378180 other downstream 2531664 4915813 ~ 4921820 (+)

Expression


Co-expression Network