G70623


Basic Information

Item Value
gene id G70623
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 2535466 ~ 2537335 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU95269
TTGTTTTGCGTCCCAGCCGGCTGGAGCCAGAGGTCAGGGCTGGCTTCACTTTGACCCAGCTGTGCTTCTCCTTCTCCCATCCATGAGGGCTAGTCCTGTCCTCGCTTTCCCCACAGGAGATCACTTCTTCGTGGGTTTCCTGCGATTCGGCTCTTCCCAGCGTGGTCAGCGTGGTAGCCCCGGGCCCTGACCAGCTGACACCTCTCCTGACGGGGTCGTGCTCCTGCTCCATCCTTTCCTCCTGGCCCGAGGCTGGAGAAAGTTCAGCGGAGGTTATTAGTTTAGGAGTTTTAAGAGCGAGGAAGCGTCTTGTGGTCTGTAGCGTCTCGTCTGCTTGCTTCTCTGCCTGTCCAGGCTTGACCGaagctttgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95269 True 372 lncRNA 0.58 2 2535466 2537335

Neighbor

gene id symbol gene type direction distance location
LOC103041625 ddah2,LOC108435833,LOC107660989,LOC106570066 coding upstream 1562623 957420 ~ 972843 (+)
LOC103041930 clic1,LOC108274855,LOC107660990,LOC107753388,LOC107708731,LOC107679037,LOC107564667 coding upstream 1622944 899894 ~ 912522 (+)
LOC103042240 LOC103042240 coding upstream 1658062 867909 ~ 877404 (+)
LOC103036550 NA coding upstream 1757460 640691 ~ 778006 (+)
LOC111193065 NA coding upstream 2125244 404610 ~ 410222 (+)
gpx3 LOC108415088 coding downstream 153403 2690738 ~ 2701134 (+)
LOC103025734 LOC108439812,LOC108275395,LOC105903016,LOC107749739,LOC107653313,LOC107594883 coding downstream 291074 2828409 ~ 2854104 (+)
LOC103021672 LOC108439811,LOC107749774,LOC107653301,LOC107594902 coding downstream 320560 2857895 ~ 2866216 (+)
LOC103025421 n4bp3 coding downstream 334241 2871576 ~ 2946729 (+)
LOC103047122 LOC108439803 coding downstream 521189 3058524 ~ 3081939 (+)
G70618 NA non-coding upstream 31161 2498649 ~ 2504305 (+)
G70608 NA non-coding upstream 99388 2434979 ~ 2436078 (+)
G70611 NA non-coding upstream 131534 2403414 ~ 2403932 (+)
G70606 NA non-coding upstream 151317 2381256 ~ 2384149 (+)
G70595 NA non-coding upstream 179570 2343359 ~ 2355896 (+)
G70642 NA non-coding downstream 88827 2626162 ~ 2662604 (+)
G70643 NA non-coding downstream 121057 2658392 ~ 2705250 (+)
G70652 NA non-coding downstream 146601 2683936 ~ 2702495 (+)
G70660 NA non-coding downstream 219808 2757143 ~ 2757834 (+)
G70676 NA non-coding downstream 226009 2763344 ~ 2763639 (+)
G70604 LOC108436838 other upstream 176237 2358883 ~ 2359229 (+)
lrrtm2 lrrtm2,LOC107680618,LOC107750357,LOC103471148 other upstream 341907 2088920 ~ 2193559 (+)
G70522 NA other upstream 1266062 1268767 ~ 1269404 (+)
G70385 NA other upstream 1529628 1005483 ~ 1005838 (+)
LOC111193067 NA other upstream 1680308 845025 ~ 855158 (+)
LOC103024487 syngap1a,LOC108275193,LOC108439800 other downstream 584583 3121918 ~ 3292475 (+)
G70846 NA other downstream 840349 3377684 ~ 3378610 (+)
LOC111193071 NA other downstream 872335 3409670 ~ 3574758 (+)
LOC103028288 LOC108435610,LOC108275213,LOC106520856 other downstream 1819730 4357065 ~ 4441931 (+)
atpif1 atpif1,LOC105912502,LOC107571275,LOC104922170,LOC107730904,LOC103378180 other downstream 2378478 4915813 ~ 4921820 (+)

Expression


Co-expression Network