G70624


Basic Information

Item Value
gene id G70624
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 2381317 ~ 2384167 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU95271
TAAATTATACCAACAGCAGTGTTTAATTGTATAGAACGTTTTACAGTGAGTGCAGTTCTAAAACTCAGGGTCCTGTTTCACAACACAGAACGGCCACAGTTCTCCTCCACATATTACTGAAACAGTTAGTGAGATAACAGCATTACATAAACAAACCCGAGTCAAATGACCTCCTCTCTGGCCAAAACACACATCTTGTGCACAAGAGCCATAAAACAAGCTCTCCGGTCGTTTCAGCGGGCAGACCTGTGGTCAGTGCATGGCTCACCACTCGTGCACCACTGCCACGAGCACTTCTTCTAAATCACCATGTCCCTGTAGGGTGTTATGGGTAAATCAGAGCTGCTAGgatttattaataaagtttgGGATTGAGCTTTTAAAGCTAATTGTAAAAACATTTACCTCCATCATGAATGTAAATGTCATGGTAGAATATTTAGGTTTCAGTGAttttttaggcccaatcccatttcactacttacccctaccccttgatTTCAAGTTTAACCCTTCACTTTggaacagagttataaggggaaggggtgaaatcttTCTGCAACCGGGCAGCACATCATCAGATACACATGAACCACAGTTACAtcatatacaaacacaaaacacacaaatccAGCACTTTAGATTAGGCCACAAACCTGGTCAACACAAGAGATGGCATATCACTACAGATGGGTGTTGTAAttggGCTTATCAATTAATACCAGTCAAATATTTGGATAGACTTTTAATTTagtgctttttctttattttaaaaaggttttgctttgtagattaatgctaaagtcacccaaactatgaagaataAACCAAAGTagacacctcttgcttagaaaaaagtgtttgagagcatcagttaaagtaaagtagtgaagaggtagagttacaggtatacagtgaatagtgaatatttgagtaatgttctaatccagattatgagaagcaactacttaacttatgtatgaattctaccagtcaggttgtaaggagcagaaaagccactccactgaagtgctgCATTATCAGGAtgagttttagtaaagtttctccagcactaaggctgggtgcagcagcattagcattagccgctaacaacagcactagctctttcgctgtttagGCAAGCCAACGCTAATTGGTTGAGCAGGGATATGGATGCGGCAACAGTGAGATTGGGACGAGATCAAACATGGAACAGAACAAAATATAGGGATATAATTGAGAATTTACTTTATTCcagtaattcaataaaaca

Function

GO:

id name namespace
GO:0010035 response to inorganic substance biological_process
GO:0010038 response to metal ion biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95271 True 1273 lncRNA 0.39 2 2381317 2384167

Neighbor

gene id symbol gene type direction distance location
LOC103026956 ctnna1 coding downstream 160953 1998156 ~ 2220364 (-)
LOC103041113 ppt2 coding downstream 1375440 988446 ~ 1005877 (-)
rps5 rps5 coding downstream 1398714 975095 ~ 982603 (-)
LOC111193040 NA coding downstream 1443133 932017 ~ 938184 (-)
LOC103044579 NA coding downstream 2185034 178319 ~ 196283 (-)
LOC103026657 tspan17,LOC108436843,LOC107749748,LOC107680656 coding upstream 51513 2435680 ~ 2488996 (-)
LOC103022920 NA coding upstream 116821 2500988 ~ 2535981 (-)
dctn4 dctn4,LOC107749746 coding upstream 277344 2661511 ~ 2678905 (-)
anxa6 anxa6,LOC107750364,LOC107594885 coding upstream 379978 2764145 ~ 2816535 (-)
rmnd5b rmnd5b,LOC105026275,LOC100306854,LOC106612137 coding upstream 574482 2958649 ~ 2982646 (-)
G70605 LOC108436838 non-coding downstream 22088 2358811 ~ 2359229 (-)
G70597 NA non-coding downstream 34465 2311285 ~ 2346852 (-)
G70602 NA non-coding downstream 34491 2331296 ~ 2346826 (-)
G70598 NA non-coding downstream 58611 2313796 ~ 2322706 (-)
G70579 NA non-coding downstream 143802 2237299 ~ 2237515 (-)
G70628 NA non-coding upstream 19244 2403411 ~ 2403865 (-)
G70629 NA non-coding upstream 35392 2419559 ~ 2434902 (-)
G70632 NA non-coding upstream 39869 2424036 ~ 2455464 (-)
G70662 NA non-coding upstream 185720 2569887 ~ 2616400 (-)
G70666 NA non-coding upstream 254395 2638562 ~ 2703705 (-)
LOC103042850 cratb,LOC108435838,LOC108274804,LOC107561339,LOC107758403,LOC105903715,LOC107563340,LOC107679039 other downstream 1346301 1009886 ~ 1035016 (-)
tnip1 tnip1,LOC107594924,LOC107750363 other upstream 320028 2704195 ~ 2745072 (-)
G70924 ndufb9 other upstream 895989 3280156 ~ 3353599 (-)
LOC111193045 LOC108442482,LOC102793828 other upstream 1059928 3444095 ~ 3458810 (-)
LOC103023864 NA other upstream 1191394 3575561 ~ 3703751 (-)
LOC103042226 LOC108274609,LOC107701883,LOC100536156,LOC107747745,LOC107574915,LOC108442488 other upstream 1352459 3736626 ~ 3848624 (-)

Expression


Co-expression Network