G70735 (n4bp3)


Basic Information

Item Value
gene id G70735
gene name n4bp3
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 2941053 ~ 2941636 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU95422
ATGAATTCAGACCTGTGCGATGGCGTCCTCGCTCTCGTCCAGGTTCCTCCTCATCTGCCGCAGCTCGTGCTCCTTCTCCTGCAGACGCTCCTCCAGCTCCCTCACCACCTCCTCCAGAGAGTGCGACAGCTCGTAAGGGGGCGGAGCCTCGCTGCCGGTGCTGTAGCACTGTAATCGGCCCAGCGTGGCCATGCTGCGCCCCGCCGGCCCGCCGCCGCCCCCCGAGCCCAGCGAGGCCCGGTCCAGGGAGCCGATGTGGTCGATGTGGCCCATGGAGGCGCTGATGTGGGACAGGTGGGGGCGGTAAGGGGGGCGGTACGGGGGCAGGCTGCTCATGGAGTTGTGTCCCGAGTCGGACGCCGTCTCCTCGCCCTCCTGGCTCAGGGCCCGGGGGGTCGCCAGGACCCCTTTGTTGGCGCTGGTGGCCCCGCGGGACGgggacgaggaggaggaggacatgGACAGTGACTTGGTGGCCGTCTTGCTGCTGCTCCCCAGATCCTCAGGTTTGGACGGGTAGAGGTTCTGGACGGAGCTGAAGTTCTTTGGAGTGACAGGTTTAAACGCAGACGGCCTGAGAcgag

Function

symbol description
n4bp3 Predicted to be located in postsynaptic density. Orthologous to human N4BP3 (NEDD4 binding protein 3).

NR:

description
PREDICTED: NEDD4-binding protein 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95422 True 584 lncRNA 0.67 1 2941053 2941636

Neighbor

gene id symbol gene type direction distance location
anxa6 anxa6,LOC107750364,LOC107594885 coding downstream 124518 2764145 ~ 2816535 (-)
dctn4 dctn4,LOC107749746 coding downstream 262148 2661511 ~ 2678905 (-)
LOC103022920 NA coding downstream 405072 2500988 ~ 2535981 (-)
LOC103026657 tspan17,LOC108436843,LOC107749748,LOC107680656 coding downstream 452057 2435680 ~ 2488996 (-)
LOC103026956 ctnna1 coding downstream 720689 1998156 ~ 2220364 (-)
rmnd5b rmnd5b,LOC105026275,LOC100306854,LOC106612137 coding upstream 17013 2958649 ~ 2982646 (-)
LOC103025117 NA coding upstream 40411 2982047 ~ 3019753 (-)
LOC103047641 c14h5orf24,LOC108439806,LOC107594921,LOC107668575,LOC107749736 coding upstream 81783 3023419 ~ 3027693 (-)
tmem65 tmem65,LOC103374125,LOC100698042,LOC102786671,LOC101476933,LOC104966521 coding upstream 356574 3298210 ~ 3317552 (-)
rnf139 rnf139,LOC106569923 coding upstream 382262 3323898 ~ 3335786 (-)
G70733 NA non-coding downstream 20668 2920042 ~ 2920385 (-)
G70730 NA non-coding downstream 58088 2882482 ~ 2882965 (-)
G70728 NA non-coding downstream 60929 2879924 ~ 2880124 (-)
G70703 NA non-coding downstream 90679 2849950 ~ 2850374 (-)
G70691 NA non-coding downstream 174173 2766605 ~ 2766880 (-)
G70736 n4bp3 non-coding upstream 1717 2943353 ~ 2943607 (-)
G70738 NA non-coding upstream 3521 2945157 ~ 2946974 (-)
G70770 NA non-coding upstream 5805 2947441 ~ 2949903 (-)
G70771 NA non-coding upstream 9937 2951573 ~ 2951917 (-)
G70769 NA non-coding upstream 12976 2954612 ~ 2956174 (-)
tnip1 tnip1,LOC107594924,LOC107750363 other downstream 195981 2704195 ~ 2745072 (-)
LOC103042850 cratb,LOC108435838,LOC108274804,LOC107561339,LOC107758403,LOC105903715,LOC107563340,LOC107679039 other downstream 1906037 1009886 ~ 1035016 (-)
G70924 ndufb9 other upstream 338520 3280156 ~ 3353599 (-)
LOC111193045 LOC108442482,LOC102793828 other upstream 502459 3444095 ~ 3458810 (-)
LOC103023864 NA other upstream 633925 3575561 ~ 3703751 (-)
LOC103042226 LOC108274609,LOC107701883,LOC100536156,LOC107747745,LOC107574915,LOC108442488 other upstream 794990 3736626 ~ 3848624 (-)
G71175 NA other upstream 1470312 4411948 ~ 4413011 (-)

Expression


Co-expression Network