G70738


Basic Information

Item Value
gene id G70738
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 2945157 ~ 2946974 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU95425
CCCTGATAGCtgtcatgatttttctttataaattactggttgttcagatcagcaatttcaatcacatatatcatatagcagataaacacagtgatatttaagaagagaaatgcaataattctttaaactaaattaggcaggtgcataaatttgggcaccctacaagcttcctatagcttccaatgaaattcttctttacaaaacatctccagttcagtcaggtttgatggtttctgagcaagAAAAGccagctttaaatcacaccacaggttttcaataatattcatatcatatgactatgactgttctcaccatccttcagAAATCTCTGAAAGCATTtttatccttcctctaaaccatggtgttgaacagtctttgttttcagatcatttgagagttgtgatTTGAGGATCCCATTTTGCCGCTCTTATGAGGACTAGTAAGGCCCTCATAATAAGGGCTAACGTTTCGGTGGCACTCCATCAATGTCCATCAAACATCTGGGAGTGCAAACCCACTAGACAGTTCTGGAAGAGCAGTGCAGAGCAGCTTTGGATTCAGCATTTCAGAATATTGGCTCTGAAAAGCTATAGTGTAGAACAGTCTGACTCCCTCAGATGTATTAtctctgtttataaataagggttaatctacagttacagtagatacagaagtATCAGCACAGTAATCAGATATACTTATACTGCTGTATGAGATGCCAATTGAAGAGGAGTTGAATTTTGACACAACacctgttctttttcttcttctattgtttaacagGTTACAATAGCCTGCCTCAAAAGTCAGAACAAAAAATCTGCAAAacagtgctttcacactgcaaatgaaCCAGACCATGGATTAATTGACCTGGATAAATTCACTGAGaccaaattgtaaaaaaaaaaactgtggttcACAGCAAGTTTCACACCTGCtttaatggataaaaaaaacctaaaatgtCTAAAGGTCCAGGAAAATAACTTTTGCCATGCCTAATGTAGAGATGTAGGCATGGGGCACCATCATGTAGGCATGTGCAGTGATTCAATGCTGAACAAGGGTTTCTGAGCAAGAACTCACACCAAACTGTGCTGTGCTGATCAGTAATGCACTGGATTAACTTGATACAAATGATGTATTACACATATTACACCAAACATGTAATTATTAAGcagttatataatttattattattatagaactgTAGAAATGATGAGCAGAATCCAGTGCATCACTTTTCCTCTGGAAATCCACcttcacacatactgtacacattcAGATCTCTGAGGACTCAATCCTTTCGATCCAGGGAAGACCTGAAGGCtgtttctcctcttcctctgaaGCCCCGCCCCCATTCGCATCCGCTCCACCCACTCCCCCTCTGAGCAGCATCAGTTCTCTCTCCAGGCTCTCGTTCTTGTGGTACATCTCCAGGTAGCTGGCCTGCAGCTCTCTCTGGTAGCGAATCACCTTCTCCTTCTCCAGCTGCCAGGTGTTCCTCTCCGCCTCGAAGGCGGAGGCCTGGGCCTCGCTCTGCCGCCGCTCCAGCAGCAGCTCCGCCCTCAGACGCTCCTCCGTGGCTCTGGACTGCTGGCTCTCCTGGGTCGGCTGGCCGTCGTCGAAGGCGCCGCCCTTGCGGCGCTCGGACTGCAGGGCCAGCTGCAGCAGATCCAGCTGTCGGTCCCTGTCCTTCACCTCGCCCCGACTCTCCCTCAGCTGAGTCTTCAGCAGGAAGATCTCACTCAGCTTCTGCGTCACCTCGGCCTGAGAGTCCCTCAGCTGCTGCTTCAGCAGGGAGATCTCGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95425 True 1818 lncRNA 0.45 1 2945157 2946974

Neighbor

gene id symbol gene type direction distance location
anxa6 anxa6,LOC107750364,LOC107594885 coding downstream 128622 2764145 ~ 2816535 (-)
dctn4 dctn4,LOC107749746 coding downstream 266252 2661511 ~ 2678905 (-)
LOC103022920 NA coding downstream 409176 2500988 ~ 2535981 (-)
LOC103026657 tspan17,LOC108436843,LOC107749748,LOC107680656 coding downstream 456161 2435680 ~ 2488996 (-)
LOC103026956 ctnna1 coding downstream 724793 1998156 ~ 2220364 (-)
rmnd5b rmnd5b,LOC105026275,LOC100306854,LOC106612137 coding upstream 11675 2958649 ~ 2982646 (-)
LOC103025117 NA coding upstream 35073 2982047 ~ 3019753 (-)
LOC103047641 c14h5orf24,LOC108439806,LOC107594921,LOC107668575,LOC107749736 coding upstream 76445 3023419 ~ 3027693 (-)
tmem65 tmem65,LOC103374125,LOC100698042,LOC102786671,LOC101476933,LOC104966521 coding upstream 351236 3298210 ~ 3317552 (-)
rnf139 rnf139,LOC106569923 coding upstream 376924 3323898 ~ 3335786 (-)
G70736 n4bp3 non-coding downstream 1550 2943353 ~ 2943607 (-)
G70735 n4bp3 non-coding downstream 3521 2941053 ~ 2941636 (-)
G70733 NA non-coding downstream 24772 2920042 ~ 2920385 (-)
G70730 NA non-coding downstream 62192 2882482 ~ 2882965 (-)
G70728 NA non-coding downstream 65033 2879924 ~ 2880124 (-)
G70770 NA non-coding upstream 467 2947441 ~ 2949903 (-)
G70771 NA non-coding upstream 4599 2951573 ~ 2951917 (-)
G70769 NA non-coding upstream 7638 2954612 ~ 2956174 (-)
G70795 NA non-coding upstream 136002 3082976 ~ 3083205 (-)
G70809 NA non-coding upstream 163831 3110805 ~ 3115995 (-)
tnip1 tnip1,LOC107594924,LOC107750363 other downstream 200085 2704195 ~ 2745072 (-)
LOC103042850 cratb,LOC108435838,LOC108274804,LOC107561339,LOC107758403,LOC105903715,LOC107563340,LOC107679039 other downstream 1910141 1009886 ~ 1035016 (-)
G70924 ndufb9 other upstream 333182 3280156 ~ 3353599 (-)
LOC111193045 LOC108442482,LOC102793828 other upstream 497121 3444095 ~ 3458810 (-)
LOC103023864 NA other upstream 628587 3575561 ~ 3703751 (-)
LOC103042226 LOC108274609,LOC107701883,LOC100536156,LOC107747745,LOC107574915,LOC108442488 other upstream 789652 3736626 ~ 3848624 (-)
G71175 NA other upstream 1464974 4411948 ~ 4413011 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000000_03962507_03966711 N4BP3 coding CI01000000 null 3962311 ~ 3966796 (+)
rainbow trout (Oncorhynchus mykiss) G1235967 LOC106604261 non-coding NC_048578.1 CM023232.3 29969231 ~ 29971305 (+)
bowfin (Amia calva) AMCG00011501 NA coding CM030133.1 CM030133.1 27415188 ~ 27423491 (-)