G70740


Basic Information

Item Value
gene id G70740
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 2954496 ~ 2956182 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU95427
gcaggtataataaacatactgtaACGATAGAAGATGAATATTTACAACAGACGTtgcattaaaaatgcaaaaagcagGAAAAGCAGATTAAATTGCACAACCAGAACCACACCTAAAGGCCATTTTCTCCCTGACGCCCTTTTAATTTTAGAGCAGTGCAGACAGGCATTCCTAACTTCCAGTTacagcttagattctctgcccgaacccaacCAGAACCTGCCCGAGATTTCCCATCACTTTCGagtcgggctcaagaaaatagtctgtgatgtaggcgtctgttaatgctattttttttatataaacttaCGGCATGATAATCCCAGCGTAGCAAAGTAataaatcaaactgtttttaaaaagttgcaGAAGTGTGCAGTGCACACTCCACTTGTCCGTATTACACACtttttctattcttaaaccatgttaaattatattagattagaggaaagtcattcagatATTAGCATCACAGCCCACtcggagtaaaaaaaaagcccagtgactcggttctgatacatcagctcacagacgcagccttgtgctgatcgacatcatcctaggactgatgaggggaaagagcgccatctactgtccccacccagagagagagcaagaccagttgtgctctctcgggcctccagcagctgatgacaagctgcatgacctggatttgaaccagtgacctcccaatcatagtggcagcgctttagaccgctagACCACTTGGCGCCCATTAGTGCATTTATAAGGTTGATTTTGGTTGTATTGAGAGTGGAGGAGGGTCAGAGTTCTAATGGTCGAATCTCCCTCTTAATGTGGAGTTCTGTGCAAGCGCAGCAGCCGAAACAAGTGAGACAATCAAGCAAGCTTTTTTTGTGCAGTTCGAGCCAAATGCtacaaaatgtaaatttaaatcagtgatttaaattagtttctgaaaaagtaatctgacaTTCAGTTTCCAGTATTTGGGTCTCCCCTGTTCAAACAAGTAGAAGGCTTGTCTCAAATACCACACTTGTTCTTCACCCCATTGCTGCCAACACTGCCTGCCTGCACTGTTCCCAAACATGCCCAAGGAAACACAGGCAAAGAAGAAGCGCTGACCTCTGGTGGCCTTAGTGTGGGTGGCCCATAGTGCTCAGAGAGGAAACAAATGATTGTCTAGTATAGAGAAAGGTGTAGAACACACAGCAACGCCCCCTGGTGGACGATAAATGGGAAACATAAAACAATTACTTGCGCCAGTTTTCAAATGGTACAGTACTTTGAGCTTGCGGTTAATTGCTGCATTTGAAAATAAAAGGTTTTATTAATACAGGTGTATCTAAAAAAacttgaatatcattgaaaagttactatattcagtaattcagttcaaaatgtgaaacatatattatatacatgtattacacacagagtgatctattttagtagtttatttatttttaatagttaatgattatggcttaccgccaatgaaaacccaaaaatcagtgtctcagaaaattagaatatttttaagACAAACTGCTACTTTTGTCagggtgggcagtgtgccaagtcctgctggaaaatgaaatccacatctccataaaagttaaaaatttactgatgatcagtgatggtttggagagacatgtcatctgctggtgttgatccactgtgttttattatca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95427 True 1687 lncRNA 0.40 1 2954496 2956182

Neighbor

gene id symbol gene type direction distance location
LOC103025421 n4bp3 coding upstream 7767 2871576 ~ 2946729 (+)
LOC103021672 LOC108439811,LOC107749774,LOC107653301,LOC107594902 coding upstream 88280 2857895 ~ 2866216 (+)
LOC103025734 LOC108439812,LOC108275395,LOC105903016,LOC107749739,LOC107653313,LOC107594883 coding upstream 100392 2828409 ~ 2854104 (+)
gpx3 LOC108415088 coding upstream 253362 2690738 ~ 2701134 (+)
LOC103041625 ddah2,LOC108435833,LOC107660989,LOC106570066 coding upstream 1981653 957420 ~ 972843 (+)
LOC103047122 LOC108439803 coding downstream 102342 3058524 ~ 3081939 (+)
LOC103046819 LOC108439802,LOC107669127,LOC107714775 coding downstream 139702 3095884 ~ 3113634 (+)
ndufb9 ndufb9 coding downstream 391586 3347768 ~ 3353595 (+)
LOC103043978 NA coding downstream 464058 3420240 ~ 3439155 (+)
LOC103032643 deptor,LOC108442483,LOC108274614,LOC107685573 coding downstream 967790 3923972 ~ 3935104 (+)
G70739 NA non-coding upstream 4591 2947454 ~ 2949905 (+)
G70716 NA non-coding upstream 7396 2946839 ~ 2947100 (+)
G70727 NA non-coding upstream 54887 2899302 ~ 2899609 (+)
G70726 NA non-coding upstream 55381 2898888 ~ 2899115 (+)
G70723 NA non-coding upstream 68268 2885986 ~ 2886228 (+)
G70742 rmnd5b,LOC106612137,LOC105026275,LOC107653309 non-coding downstream 2520 2958702 ~ 2962110 (+)
G70779 NA non-coding downstream 90210 3046392 ~ 3056964 (+)
G70819 NA non-coding downstream 318413 3274595 ~ 3276522 (+)
G70820 NA non-coding downstream 337277 3293459 ~ 3322968 (+)
G70821 NA non-coding downstream 349351 3305533 ~ 3306021 (+)
G70604 LOC108436838 other upstream 595267 2358883 ~ 2359229 (+)
lrrtm2 lrrtm2,LOC107680618,LOC107750357,LOC103471148 other upstream 760937 2088920 ~ 2193559 (+)
G70522 NA other upstream 1685092 1268767 ~ 1269404 (+)
G70385 NA other upstream 1948658 1005483 ~ 1005838 (+)
LOC111193067 NA other upstream 2099338 845025 ~ 855158 (+)
LOC103024487 syngap1a,LOC108275193,LOC108439800 other downstream 165736 3121918 ~ 3292475 (+)
G70846 NA other downstream 421502 3377684 ~ 3378610 (+)
LOC111193071 NA other downstream 453488 3409670 ~ 3574758 (+)
LOC103028288 LOC108435610,LOC108275213,LOC106520856 other downstream 1400883 4357065 ~ 4441931 (+)
atpif1 atpif1,LOC105912502,LOC107571275,LOC104922170,LOC107730904,LOC103378180 other downstream 1959631 4915813 ~ 4921820 (+)

Expression


Co-expression Network