G70809


Basic Information

Item Value
gene id G70809
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 3110805 ~ 3115995 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU95510
ttgacATAAATTCTCTTTCTAAACAATATCTCTTTCACAGTttatattttgctgtttattttgatttcttattttatttttctctaaaaATGAACAAGCAGTGAGTgttatgataatgatgatgtagCACAAGTAGGTTACAGTATGATATAAGATATATTTGCATTGCTTAGTTGCTGATTGATCATGCATTCACTGAAGAGACTAAAGTGCAGAACGTTGGGCTCTAAAACAGTCCTAAGACTATTTTTCTCATATTGCATTTTAGCGGGAGGTAATCTCCCGCTGAGAATAACCATTCAGTGCTGGTTCCCAGTGAGTTATTACATTCGCTAATCAACATTTCTTGCTTACAACTTACACAGGCTCACTTGATTGAACAAGCAAGCATATATAGCCCCATAGAAAGGGTAGGtttgggcccaatcccattttacatTCTGATTCTTAGAGGAGTAGTGTGTGCCAATTCCTTTTTTtcgatagaggggtagggtgtcctgattgtTGCTGGGATGGAGGAGTACAGTGTcacgattcttgttgggatagaggggtaatGTGTTCCAATTCTTGTTAGGATGTCCCTAATTCTTGTTGGGAAAGAAGGGTAGGGTGTTCCAATgtttgttgggatagaggggtaagtTGACCCAAATTCTTGTTGGACATAGTAAGGTAGGGTGTCATGCTTCTTGTTGGAATAAGTATTGAGTTCAACCACTTCCTCTAGTAACTGGGTTCCAAAAACAAGCTTCAGAGCTTTAATTgagaaatgggactgggccttTGTTTGCAGGCAGAAAGCAGCTGCTGCAGAGTTTCAAACTCGTTAACTAAACTCGTTAAAAGGGTTTATTGGTGTCTATGGGCCGAAGGAGTGCATGATTCAAGCTTCATAACGTGTTGAAGAAGCTCCAGCATTGAATGACAGGAACAGACTGGCTTCAACTAGCACTGTAGCCAACTGTTCTCCCAGCATATCAATGTAGCATTGGCTCTTAGCACATGCACCCATAGCACTGCATGGCGTTTGGCACACAAGACTACCACAGTGTATATATTCATTTATCTCTATATTTATACATAGCCCTGAAAAGTGAGCAAGACTACGCAGATTCCACTGCTCCTGGCTGACCTCTAGTGCAAAGTCAGAGTATTGCAataatattttctctttttttcctataTGCATGAGCACATACAGTAAGGTGGGGAAAGCATGATTCAGTCAGTTTTCATTACAAAGCCTATATAACATACTTTTATATGTGCGCCTTTATACTATATGAGGTATAGCATATACATGGTTAGAAGGGATGCTGATGTCATGCTGCAATTGGAAGTTAATAAACTCATGCAAACAGGAAGTCTTTACATTAAAGTCCTTATTTCACTTTTGATCACCCATCCTGCAGTGTATCTGCACGGCACATGTCTGtgcatttcattttcaaatactCTTCATCCCACCAGCTAAGCCAACTCTAGGGTCAGTTGTGGCAACAGGGGTGCTACAGGACAGGGCTTAGGGggctttgtttttttactcCGCCAGTCCTGTATTGGATAAGAAGTAGGCAGTACAAAAATCAAGAAATTCTGGACATTTGTGACGGTGTAAGGAAGACGTGGACATCAGGTTTTGGCCACACATTATGGTCAGAGCAGGAAAAACCTCTGTTATTCAGCCACCTGCACGCCTGCACAGTTATCTTTACTCTCCGATGCTATCGCTAAATACTCCgccctgcaaacacacacacacacacacacaaacatacacaccagatTAAGAGTTACTGGTTAGACAAAAGCAGCTTAATGTATGGtaaaaattactattttattcagACCAGATCAGAAACTGTAAGTACTGTATAATAAGATAGgaaggggtttcta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95510 True 1905 lncRNA 0.40 3 3110805 3115995

Neighbor

gene id symbol gene type direction distance location
LOC103047641 c14h5orf24,LOC108439806,LOC107594921,LOC107668575,LOC107749736 coding downstream 83112 3023419 ~ 3027693 (-)
LOC103025117 NA coding downstream 91052 2982047 ~ 3019753 (-)
rmnd5b rmnd5b,LOC105026275,LOC100306854,LOC106612137 coding downstream 128159 2958649 ~ 2982646 (-)
anxa6 anxa6,LOC107750364,LOC107594885 coding downstream 294270 2764145 ~ 2816535 (-)
dctn4 dctn4,LOC107749746 coding downstream 431900 2661511 ~ 2678905 (-)
tmem65 tmem65,LOC103374125,LOC100698042,LOC102786671,LOC101476933,LOC104966521 coding upstream 182215 3298210 ~ 3317552 (-)
rnf139 rnf139,LOC106569923 coding upstream 207903 3323898 ~ 3335786 (-)
tatdn1 tatdn1 coding upstream 220214 3336209 ~ 3346476 (-)
mtss1 mtss1,LOC106569924 coding upstream 246576 3362571 ~ 3407431 (-)
LOC103024174 LOC108442487 coding upstream 345242 3461237 ~ 3508996 (-)
G70795 NA non-coding downstream 27600 3082976 ~ 3083205 (-)
G70769 NA non-coding downstream 154631 2954612 ~ 2956174 (-)
G70771 NA non-coding downstream 158888 2951573 ~ 2951917 (-)
G70770 NA non-coding downstream 160902 2947441 ~ 2949903 (-)
G70738 NA non-coding downstream 163831 2945157 ~ 2946974 (-)
G70812 NA non-coding upstream 889 3116884 ~ 3117089 (-)
G70923 NA non-coding upstream 161481 3277476 ~ 3291961 (-)
G70926 NA non-coding upstream 189524 3305519 ~ 3306018 (-)
G70927 NA non-coding upstream 193457 3309452 ~ 3309851 (-)
G70938 NA non-coding upstream 298593 3414588 ~ 3415039 (-)
tnip1 tnip1,LOC107594924,LOC107750363 other downstream 365733 2704195 ~ 2745072 (-)
LOC103042850 cratb,LOC108435838,LOC108274804,LOC107561339,LOC107758403,LOC105903715,LOC107563340,LOC107679039 other downstream 2075789 1009886 ~ 1035016 (-)
G70924 ndufb9 other upstream 164161 3280156 ~ 3353599 (-)
LOC111193045 LOC108442482,LOC102793828 other upstream 328100 3444095 ~ 3458810 (-)
LOC103023864 NA other upstream 459566 3575561 ~ 3703751 (-)
LOC103042226 LOC108274609,LOC107701883,LOC100536156,LOC107747745,LOC107574915,LOC108442488 other upstream 620631 3736626 ~ 3848624 (-)
G71175 NA other upstream 1295953 4411948 ~ 4413011 (-)

Expression


Co-expression Network