G71075


Basic Information

Item Value
gene id G71075
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 4189625 ~ 4192656 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU95880
tttttgctgcattatattattttatgctatattatttattttgccacattatgattattctgttatactattatactatattcctaaaattaattaattatttttctgtttcctatatcgccaagtatatcgttatcgcaaaaataccctgaaatatcgtgatattattttatagccatatcgcccacccctagttgtcACTATACACAAATTCTGACTTTTGATACGATACCAGAGAGAATACGGacacaaacaccacagcaaAAACCTGAAACATTagaaattaacaaaataatagaatattataaaatatattataaaataaaataatttgtattttacacAGCCGTGGGGAAACTCAAAGACAACACAGAGCTCTcctcagacactggattatactttaGAACGCCGGTTTGCagacagcgtcctgtgggcactgATGAAATACTAGAGAATGACTAACACAAACTGAttcagcaacagattcagagcttctgtctctgactttactttatctacaaggtgtttcagctgtaggtaggagtgtgtaatagagtggaggacagttagagattaaacacagtgtttaaaacctccagcagcactgctgtatctgatccactcactgtaccaccagctcaacacacactaacacctcatacaccaccaccatgctaatcactgctaatcactgctgtatctgatccactcactgtaccaccagctcaacacacactaacacctcatacacccccaccatgctaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95880 True 765 lncRNA 0.37 2 4189625 4192656

Neighbor

gene id symbol gene type direction distance location
LOC103042852 LOC108274605,LOC108435589,LOC105028044 coding upstream 83662 3955008 ~ 4105963 (+)
LOC103032643 deptor,LOC108442483,LOC108274614,LOC107685573 coding upstream 254521 3923972 ~ 3935104 (+)
LOC103043978 NA coding upstream 750470 3420240 ~ 3439155 (+)
ndufb9 ndufb9 coding upstream 836030 3347768 ~ 3353595 (+)
LOC103046819 LOC108439802,LOC107669127,LOC107714775 coding upstream 1075991 3095884 ~ 3113634 (+)
dpy19l4 dpy19l4 coding downstream 114009 4306665 ~ 4339082 (+)
LOC103029142 LOC108435612,LOC108274509,LOC107571533,LOC107571277,LOC107730909 coding downstream 665192 4857848 ~ 4884488 (+)
hnrnpr hnrnpr,LOC103029778,LOC105909056 coding downstream 736521 4929177 ~ 4935065 (+)
dnajc8 dnajc8,LOC102775708 coding downstream 750550 4943206 ~ 4954889 (+)
LOC111193076 NA coding downstream 763623 4956279 ~ 4957026 (+)
G71073 NA non-coding upstream 35396 4151858 ~ 4154229 (+)
G71052 NA non-coding upstream 98991 4090088 ~ 4090634 (+)
G71048 NA non-coding upstream 194035 3994907 ~ 3995590 (+)
LOC111193074 NA non-coding upstream 229422 3956444 ~ 3960203 (+)
G71019 LOC108442489,LOC108274607,LOC105909062 non-coding upstream 300730 3884338 ~ 3888895 (+)
G71103 NA non-coding downstream 97803 4290459 ~ 4290835 (+)
G71109 NA non-coding downstream 100581 4293237 ~ 4293456 (+)
G71112 NA non-coding downstream 109895 4302551 ~ 4302810 (+)
G71118 NA non-coding downstream 146809 4339465 ~ 4340328 (+)
G71117 NA non-coding downstream 148031 4340687 ~ 4343650 (+)
LOC111193071 NA other upstream 614867 3409670 ~ 3574758 (+)
G70846 NA other upstream 811015 3377684 ~ 3378610 (+)
LOC103024487 syngap1a,LOC108275193,LOC108439800 other upstream 897150 3121918 ~ 3292475 (+)
G70604 LOC108436838 other upstream 1830396 2358883 ~ 2359229 (+)
lrrtm2 lrrtm2,LOC107680618,LOC107750357,LOC103471148 other upstream 1996066 2088920 ~ 2193559 (+)
LOC103028288 LOC108435610,LOC108275213,LOC106520856 other downstream 164409 4357065 ~ 4441931 (+)
atpif1 atpif1,LOC105912502,LOC107571275,LOC104922170,LOC107730904,LOC103378180 other downstream 723157 4915813 ~ 4921820 (+)
G71247 NA other downstream 763642 4956298 ~ 4980011 (+)
G71249 NA other downstream 771046 4963702 ~ 4967907 (+)
G71414 gstp1 other downstream 1307252 5499908 ~ 5505638 (+)

Expression


Co-expression Network