G71209


Basic Information

Item Value
gene id G71209
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 4678331 ~ 4678722 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU96062
tttgatcagctgtggttttatgttttttggatacaatccaggttagcacccgaacatccctttcagacagcttcctcttacatccacagttaatcctgttggatgtggttggtccttcttggtggtatgctgacattaccctggataccgtggctcttgatacttgatcacaaagacttgctgtcttggtcacagatgctccagcaagacgtgcaccaacaatttgtcctcttttgaactctggtatgtcacccataatgttgtgtgcattgcaatattttgagtaaaactgtgctcttaccctgctaattgaaccttcacactctgctcttactggtgcaatgtgcaattaatgaagactggccaccaggttgctccaatttaaccatgaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96062 True 392 lncRNA 0.43 1 4678331 4678722

Neighbor

gene id symbol gene type direction distance location
dpy19l4 dpy19l4 coding upstream 339249 4306665 ~ 4339082 (+)
LOC103045063 LOC108435620 coding upstream 462615 4132022 ~ 4215716 (+)
LOC103042852 LOC108274605,LOC108435589,LOC105028044 coding upstream 572368 3955008 ~ 4105963 (+)
LOC103032643 deptor,LOC108442483,LOC108274614,LOC107685573 coding upstream 743227 3923972 ~ 3935104 (+)
LOC103043978 NA coding upstream 1239176 3420240 ~ 3439155 (+)
LOC103029142 LOC108435612,LOC108274509,LOC107571533,LOC107571277,LOC107730909 coding downstream 179126 4857848 ~ 4884488 (+)
hnrnpr hnrnpr,LOC103029778,LOC105909056 coding downstream 250455 4929177 ~ 4935065 (+)
dnajc8 dnajc8,LOC102775708 coding downstream 264484 4943206 ~ 4954889 (+)
LOC111193076 NA coding downstream 277557 4956279 ~ 4957026 (+)
LOC111193046 NA coding downstream 300745 4979467 ~ 4980022 (+)
G71201 NA non-coding upstream 56091 4621818 ~ 4622240 (+)
G71194 NA non-coding upstream 166934 4510801 ~ 4511397 (+)
G71132 NA non-coding upstream 217189 4445766 ~ 4461142 (+)
G71147 herpud2,LOC108435611,LOC108275212,LOC107686057,LOC107737813,LOC107592253,LOC105897640 non-coding upstream 217930 4455930 ~ 4460401 (+)
G71129 NA non-coding upstream 295650 4371144 ~ 4382681 (+)
G71215 NA non-coding downstream 65431 4744153 ~ 4844213 (+)
G71244 NA non-coding downstream 262687 4941409 ~ 4942117 (+)
G71248 NA non-coding downstream 279434 4958156 ~ 5006225 (+)
G71246 NA non-coding downstream 285249 4963971 ~ 4968919 (+)
G71256 NA non-coding downstream 312130 4990852 ~ 4993179 (+)
LOC103028288 LOC108435610,LOC108275213,LOC106520856 other upstream 236400 4357065 ~ 4441931 (+)
LOC111193071 NA other upstream 1103573 3409670 ~ 3574758 (+)
G70846 NA other upstream 1299721 3377684 ~ 3378610 (+)
LOC103024487 syngap1a,LOC108275193,LOC108439800 other upstream 1385856 3121918 ~ 3292475 (+)
G70604 LOC108436838 other upstream 2319102 2358883 ~ 2359229 (+)
atpif1 atpif1,LOC105912502,LOC107571275,LOC104922170,LOC107730904,LOC103378180 other downstream 237091 4915813 ~ 4921820 (+)
G71247 NA other downstream 277576 4956298 ~ 4980011 (+)
G71249 NA other downstream 284980 4963702 ~ 4967907 (+)
G71414 gstp1 other downstream 821186 5499908 ~ 5505638 (+)
LOC103037414 NA other downstream 993996 5672718 ~ 5678874 (+)

Expression


Co-expression Network