G71235


Basic Information

Item Value
gene id G71235
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 4882170 ~ 4884488 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU96095
TAAtatagatttttcttttattagaaaTAACACATATTCATTTTGTGCTCTGAAAACTGTACacgtggaaaaaaataaaagaataaagacATAGAAATGAAAAAGGACAGAAAACATTCAGGTAGGAACTTGAACACCTGTACCGTGTAAGACTGGAACGAGAGGGAAGGTTATTGGCACATAGGGTGACACATAGAGTTCCATAACACAGGACAATACAGAGGACTGGCAATTCAGTAATCTGACAATGGGGAGGGGGTGGGGCATCAAGTAGAAAACCAAAGGTATTTACCTGAAACTCTATGGTCTattattctttatatataatatatctattttcattttccaaaattaATATTGGTCACAGGACTCAATGTCATGTGCTTTCATCCATTACATCCTCATGGTGAAAGAATCTTTGATCGTTGCTAACGCAAAGTCCTTATACAGTGTTCTTCTCATAATAAATGTGTCTATATGCTCTATAAACATAGTACAAAAATCTctggaaataacaaaaaaatatgtcaaGGGTCTGACATCAGCCTCGCTTGAGCATCAAGCGTCCGTCGTCATATTGCACAGTTATCTTTCGCTCTGTCTGCACAACGTGAGAGTCTGAGAGTTTGCAGTCTCTACAAGCTGGCACTGTGGAAGTTCTGATGAAGCTCATGGGAGAGGCAGGGCCAGAACAGCCTCAGTTAAGGATGTGCTGAGGTGCCTCAAGGCCCAATGCTATGGTCTATGAGGTTTCCTAAtaatgcatttctttttttcgtCTATAGTTCGCAAGGCTGTAGAAAGAGCTGAAGTAGCGGAAATGGAGGCGAAACACAACCAAAAAATTTGATGCAAATTATCCAATGAGGCCTTCAGCAGAGGACAATCCGTATCCACCGCAACACAGTCACTGGCGTCCGGCCGTTTGGTACCAGGGAACAATGCACCAGGGTTGCTCCAGACGCAGCTGTGGCGTAATGCAAGTGGGGCATGAGGTCTTGAGTTTGAGTGTCTCTGTGAAGCCACACCTCCACTTCCTCTCCACTCTCCTCTGCTCTTTCTCCTTAAGAAAAGCTCATTATGCCTTGAagatgatttcttttttttgggatCTGGTGATTTGATGAGTGATTTGACTTAAAACTTGAACTTATTTGGAAAATCAGTGACAAAACATCTTCGAaccaaagaaaataaagaataaagaaacatAACATTCAATAGAAATCATATCCATAATGATATTCACATAAGAACACATAAAAATCAATGATAATAACTGCAACAATAATAGAAGATAACAACAACAGATGTTCAGCTCTTATAGTCCTATACAAGCCTTGAATACGAGTCCAGAAAAGCTATGCTGAGAGACTCTGAATAGAGTTCAGTGGAAGAGTCTATAATAAGCTCCATAGAAGCAGCTCTACATCAAAGCGATTAAAAACCACAAACCACAGCGTAAACATCTCGCAAAAACATGCGTCCATCCACCGCAGGGTTGGAAATACCCCAGAGGCTGCTGGGAGGTCGCTCGACGCTCGTCTTCCTCCACTAGCAAGCGGAGAGGAGGTGCTGGAAGAGGCCCCCGAAGAGGCCAAGCTCAAAGCAGCCGAGCGATCGGACGGTACTTTGGCCAGAGGCCCCGCCCCTTTCCACGCTGAAGTCGAAGGAAAAACTGAAAAGGCACAGGCATGAAGACCACACCTCTCCTGGACCAGACGGAAGAGTAATGGGAGAAGCTCTCGGCGGAACCACCTTCGCCAACCACTTTGGACCCGGAGGAGAACCAATCAAATCTCCACGTCTCCACTAACGTTACCATCAAATGCTACTTCCTGACAGCTACTGGTGAAGCTTGAGGATACATGAATTCACAATTTGTGCTTACaccttttcttcctctctcttttgtccatctttttttttccttttccttttttttggttcTCTTCATTCTACTCCTCTCTTCATCTCCTTCATCCTTCTGCATCTATCCAGCTTCCACCGCTTCCCCAATTCCCTTCAGAATCTGCcctcttttccttctttcccAAACCAAAAGGAGCCAGGGGTGTACAGGGGTTTTCACAGCAAGGCCTTCACACCTCCGTCTGCAGGTCGATGATGTCTTGGCCCACCAGAGGGATGGTGGTGCTGGCCTTTTCCCACTCCACGGTGGGCAGTTCAAGAGGGGACGCTGCCAGGGGCTCAAGGTCTTTCCGTACCCAGGCCGGGGGCGACGTCTGCGACCGGGGCATGCTCTCCCACGACCGCTCTCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96095 True 2284 TUCP 0.45 2 4882170 4884488

Neighbor

gene id symbol gene type direction distance location
LOC103026470 LOC108435611 coding downstream 419198 4447172 ~ 4462972 (-)
LOC103042532 LOC108442489 coding downstream 971641 3862118 ~ 3910529 (-)
LOC103024174 LOC108442487 coding downstream 1373174 3461237 ~ 3508996 (-)
mtss1 mtss1,LOC106569924 coding downstream 1474739 3362571 ~ 3407431 (-)
tatdn1 tatdn1 coding downstream 1535694 3336209 ~ 3346476 (-)
LOC103041488 NA coding upstream 73617 4958105 ~ 5013867 (-)
LOC111193075 NA coding upstream 77101 4961589 ~ 4975625 (-)
kdm1b kdm1b coding upstream 130384 5014872 ~ 5046137 (-)
nudcd2 nudcd2 coding upstream 246114 5130602 ~ 5137613 (-)
LOC103044536 LOC108435599,LOC564855,LOC107684857,LOC103391210,LOC103359223 coding upstream 527228 5411716 ~ 5422882 (-)
G71222 NA non-coding downstream 139657 4695742 ~ 4742513 (-)
G71210 NA non-coding downstream 203421 4678391 ~ 4678749 (-)
G71205 NA non-coding downstream 212492 4669422 ~ 4669678 (-)
G71202 NA non-coding downstream 259864 4622020 ~ 4622306 (-)
G71178 NA non-coding downstream 391292 4416562 ~ 4490878 (-)
G71237 NA non-coding upstream 1700 4886188 ~ 4886461 (-)
G71307 hnrnpr,LOC103029778,LOC107730908,LOC105909056,LOC107703089 non-coding upstream 27132 4911620 ~ 4932167 (-)
G71309 NA non-coding upstream 35067 4919555 ~ 4921819 (-)
G71305 NA non-coding upstream 48969 4933457 ~ 4935045 (-)
G71308 NA non-coding upstream 52149 4936637 ~ 4939375 (-)
G71175 NA other downstream 469159 4411948 ~ 4413011 (-)
LOC103042226 LOC108274609,LOC107701883,LOC100536156,LOC107747745,LOC107574915,LOC108442488 other downstream 1033546 3736626 ~ 3848624 (-)
LOC103023864 NA other downstream 1178419 3575561 ~ 3703751 (-)
LOC111193045 LOC108442482,LOC102793828 other downstream 1423360 3444095 ~ 3458810 (-)
G70924 ndufb9 other downstream 1528571 3280156 ~ 3353599 (-)
trnaw-cca_42 NA other upstream 39512 4924000 ~ 4924071 (-)
G71458 atp7a,LOC107554685,LOC107684827,LOC107745084,LOC107559604 other upstream 587178 5471666 ~ 5476375 (-)
LOC103035656 LOC103035656,LOC108414340,LOC108274783 other upstream 945133 5829621 ~ 5841707 (-)
G71771 NA other upstream 1892751 6777239 ~ 6824756 (-)
G71826 NA other upstream 2172622 7057110 ~ 7057643 (-)

Expression


Co-expression Network