G71247


Basic Information

Item Value
gene id G71247
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 4956298 ~ 4980011 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU96113
TGCTTCAGTGCTCTGGGAGTGTTTATAGTCCTGTGAGTTTAACACTTCATGACTGAGAGCTGCTACAGCAACTTCTTCACCCACAGCAGCCATGACTTTAATCCCCATCTTCATCTGGACCCTGATCTTCTGCTCTCAAGAGTCCATAGGTCAGGTGACTGTGACTCAGAGTCCTGCAGTGAAATCTGCTCTTCCAGGAGACACCGTCACCATCAGCTGCAGGACCAGTCCTGCTGTTTACAGTGACTCAAATGGTCAAAGATTACACTGGTATCAGCAGAAACCTGGAGAAGCTCCTAAACTCCTGATTAAACTTGTGAATCAGCTTCAGTCTGGTTTTGCAGCTCGTTTCAGTGGTAGTGGATCTGGATCTGACTTCACTCTGACCATCAGTGGAGTCCAGCCTGAAGATGCTGCAGATTATTACTGCCAGAGTCGTCATCATATCAGCAGCACCAACCTGT
>TU96114
TGCTTCAGTGCTCTGGGAGTGTTTATAGTCCTGTGAGTTTAACACTTCATGACTGAGAGCTGCTACAGCAACTTCTTCACCCACAGCAGCCATGACTTTAATCCCCATCTTCATCTGGACCCTGATCTTCTGCTCTCAAGAGTCCATAGGTCAGGTGACTGTGACTCAGAGTCCTGCAGTGAAATCTGCTCTTCCAGGAGACACCGTCACCATCAGCTGCAGGACCAGTCCTGCTGTTTACAGTGACTCAAATGGTCACTTCTTACACTGGTATCAGCAAAAACCAGGAGAAGTTCCTaaactgattattaaaaaaGTCACAGAGTTAGAATCTGGTTTTGCAGCTCGTTTCAGTGGTAGTGGATCTGGATCTGACTTCACTCTGACCATCAGTGGAGTCCAGCCTGAAGATGCTGCAGATTATTACTGCCAGAGTCGTCATCATATCAGCAGCACCAACCTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96113 True 464 TUCP 0.48 3 4956298 4980011
TU96114 False 464 TUCP 0.47 3 4956298 4980011

Neighbor

gene id symbol gene type direction distance location
dnajc8 dnajc8,LOC102775708 coding upstream 1409 4943206 ~ 4954889 (+)
hnrnpr hnrnpr,LOC103029778,LOC105909056 coding upstream 21233 4929177 ~ 4935065 (+)
LOC103029142 LOC108435612,LOC108274509,LOC107571533,LOC107571277,LOC107730909 coding upstream 71810 4857848 ~ 4884488 (+)
dpy19l4 dpy19l4 coding upstream 617216 4306665 ~ 4339082 (+)
LOC103045063 LOC108435620 coding upstream 740582 4132022 ~ 4215716 (+)
cfap69 cfap69 coding downstream 68495 5048506 ~ 5067507 (+)
LOC103041177 sfxn1,LOC108435595,LOC108275306,LOC107668583,LOC107749734 coding downstream 88890 5068901 ~ 5082606 (+)
LOC103040455 sept8,LOC108435605,LOC103023804 coding downstream 111867 5091878 ~ 5117839 (+)
ccng1 ccng1,LOC107745080 coding downstream 143943 5123954 ~ 5130557 (+)
gabra6 gabra6,gabra6a,LOC107554706,LOC108275227,LOC107737791,LOC107684829 coding downstream 163754 5143765 ~ 5173256 (+)
G71244 NA non-coding upstream 14181 4941409 ~ 4942117 (+)
G71215 NA non-coding upstream 112085 4744153 ~ 4844213 (+)
G71209 NA non-coding upstream 277576 4678331 ~ 4678722 (+)
G71201 NA non-coding upstream 334058 4621818 ~ 4622240 (+)
G71194 NA non-coding upstream 444901 4510801 ~ 4511397 (+)
G71256 NA non-coding downstream 10841 4990852 ~ 4993179 (+)
G71260 NA non-coding downstream 21080 5001091 ~ 5043758 (+)
G71287 nudcd2 non-coding downstream 153724 5133735 ~ 5137567 (+)
G71294 NA non-coding downstream 225205 5205216 ~ 5207077 (+)
G71304 NA non-coding downstream 315667 5295678 ~ 5298321 (+)
atpif1 atpif1,LOC105912502,LOC107571275,LOC104922170,LOC107730904,LOC103378180 other upstream 34478 4915813 ~ 4921820 (+)
LOC103028288 LOC108435610,LOC108275213,LOC106520856 other upstream 514367 4357065 ~ 4441931 (+)
LOC111193071 NA other upstream 1381540 3409670 ~ 3574758 (+)
G70846 NA other upstream 1577688 3377684 ~ 3378610 (+)
LOC103024487 syngap1a,LOC108275193,LOC108439800 other upstream 1663823 3121918 ~ 3292475 (+)
G71414 gstp1 other downstream 519897 5499908 ~ 5505638 (+)
LOC103037414 NA other downstream 692707 5672718 ~ 5678874 (+)
LOC103043949 ppp3cb,LOC108274683,LOC107660165,LOC107758531,LOC107680292,LOC107589094 other downstream 891079 5871090 ~ 5957019 (+)
G71682 LOC108430946,LOC108416517 other downstream 1545630 6525641 ~ 6538794 (+)
G71788 LOC105418110,LOC105418502,LOC106676625,LOC102305489,LOC102201812 other downstream 1901576 6881587 ~ 6885541 (+)

Expression


Co-expression Network