CI01000009_04069741_04071278


Basic Information

Item Value
gene id CI01000009_04069741_04071278
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 4069714 ~ 4071604 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_04069741_04071278.mRNA
AGAGCTTGAATTAATTATTGAATTAGCATACAATTTAAGAGTGTAACGGTTTCATAGCATGACATAGCTTATCAAACCTGATGTGGCCAGCTGAAACACTGCAGATCTTGATAGATAAGGGCTGGGTGCTAATTGGTTGTAAATACAGAGGCGGAGAGAACCTTTAAACGTAGCTAATTATCAACCTTAAAAAAAACTTCTTGAGAGGGTTTAGTAGTTGTCTTCAGTTCTTGAACAATAGCAGCATTTTGGAGTTTTTTGGGTTTTGTGGTACTTTGGGTCACTAGTCTTTTGTGTGCATTGGCACAAAGTCAACAAGCCTTCCAATGGCCTGGCAACAAACTTCTTTGAGTTTCGAGGCGAAACAGCCAGCACCTCAGGCAGATCCTCTTCAGAAGTGCAATGTGGAAGACTATGAGAAGGTGCAGTGTGGAGAGCCTGGCATTTCTTCTGCAAACTGTAATGCTATAAACTGCTGTTTTGATGGACAGCAGTGCTATTATGGCAAAGCAGTGACTGTCCAGTGTACAAGAGATAGGCAATTTGTAGTTGTGGCAATGAGAGATGCAACTCTTCCACAACTGAGCTTGGAGTCTATCAGTCTTTTGGGAGGAAGTGATCCTCCTTGTGGTCCTGTTGGCACTACTGTAGCTTTTGCCATCTACCAGTTCCCTGTCACTGCTTGTGGCACTATGATGATGGACGGTGACTTTCTAGTCTATGAAAATCGTGATACTTTATCACGAATGTCTTCTACCTATAAAATCTTCATTCATTGCAGTACATCAGTTTGCTCCCCAACTGCAGCAGACTCTTGTGTTCAGAGTTGCAACAGGAATAGGAGAGCTGCTGGGACACTAGAAGCAGATGGTATCCGTGCAGTTGTCTCCAGTGAAGTTATCCTTAGTTTCTAAGTTTTCTCTGACTCATCTTGCAATAAA

Function

NR:

description
Zp2.2 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_04069741_04071278.mRNA True 941 mRNA 0.42 5 4069714 4071604

Neighbor

gene id symbol gene type direction distance location
CI01000009_04015167_04016764 NA coding downstream 52877 4015005 ~ 4016837 (-)
CI01000009_03791699_03858262 NCAM2 coding downstream 210480 3790698 ~ 3859234 (-)
CI01000009_03770045_03770497 NA coding downstream 299217 3769910 ~ 3770497 (-)
CI01000009_03699312_03715114 APP, APPB, APPA coding downstream 354600 3699312 ~ 3715114 (-)
CI01000009_03668956_03672426 NA coding downstream 397288 3668792 ~ 3672426 (-)
CI01000009_04196309_04197268 DNAJC28 coding upstream 124705 4196309 ~ 4197268 (-)
CI01000009_04738315_04741396 RALB.S, RALBA, RALB.L, RALB coding upstream 666625 4738229 ~ 4742426 (-)
CI01000009_04778332_04780190 NA coding upstream 706449 4778053 ~ 4786216 (-)
CI01000009_04888729_04895882 NA coding upstream 816593 4888197 ~ 4896479 (-)
CI01000009_04976520_04987680 NA coding upstream 904882 4976486 ~ 4987707 (-)
G52773 NA non-coding downstream 6053 4063231 ~ 4063661 (-)
G52770 NA non-coding downstream 21453 4047823 ~ 4048261 (-)
G52743 NA non-coding downstream 326161 3743327 ~ 3743553 (-)
G52739 NA non-coding downstream 333575 3735823 ~ 3736139 (-)
G52736 NA non-coding downstream 338181 3731313 ~ 3731533 (-)
G52831 NA non-coding upstream 35543 4107147 ~ 4107370 (-)
G52878 NA non-coding upstream 209741 4281345 ~ 4281805 (-)
G52995 NA non-coding upstream 255882 4327486 ~ 4327685 (-)
G53002 NA non-coding upstream 287983 4359587 ~ 4479642 (-)
G53007 NA non-coding upstream 299818 4371422 ~ 4414015 (-)
CI01000009_03261739_03262843 NA other downstream 807757 3261038 ~ 3262843 (-)
CI01000009_02885473_02893975 NA other downstream 1170307 2883688 ~ 2893975 (-)
G52410 NA other downstream 1507181 2551724 ~ 2562533 (-)
G52098 NA other downstream 2662087 1401932 ~ 1407627 (-)
G52828 NA other upstream 145816 4217420 ~ 4231469 (-)
G53515 NA other upstream 1430791 5502395 ~ 5505248 (-)
G55814 NA other upstream 4354217 8425821 ~ 8428012 (-)
CI01000009_08858198_08860555 NA other upstream 4786548 8856310 ~ 8860563 (-)
G59097 NA other upstream 8216613 12288217 ~ 12289518 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location