G71324


Basic Information

Item Value
gene id G71324
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 4985007 ~ 4986652 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU96234
gcaacaaccaacagagcaaaccgagccgtgccatttcaggcaataggggtgggggcattatattatgcacaaaaataataacgtgccgcttttaagtagtagagtaggtgccccatgcaatgtttaaagacaaaaaaagatgagcgtatcataaataattcacattgggttttaaatttaataatgtcataatttcaacacatttcattctcagtcaatttggctccctgcaactgcaaaatggttgaggcctaacgctggctgcgttgtctgcgtatgcagagcggcgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96234 True 290 lncRNA 0.42 2 4985007 4986652

Neighbor

gene id symbol gene type direction distance location
LOC111193075 NA coding downstream 9382 4961589 ~ 4975625 (-)
LOC103026470 LOC108435611 coding downstream 522035 4447172 ~ 4462972 (-)
LOC103042532 LOC108442489 coding downstream 1074478 3862118 ~ 3910529 (-)
LOC103024174 LOC108442487 coding downstream 1476011 3461237 ~ 3508996 (-)
mtss1 mtss1,LOC106569924 coding downstream 1577576 3362571 ~ 3407431 (-)
kdm1b kdm1b coding upstream 28220 5014872 ~ 5046137 (-)
nudcd2 nudcd2 coding upstream 143950 5130602 ~ 5137613 (-)
LOC103044536 LOC108435599,LOC564855,LOC107684857,LOC103391210,LOC103359223 coding upstream 425064 5411716 ~ 5422882 (-)
gstp1 gstp1 coding upstream 513363 5500015 ~ 5511729 (-)
trpc3 trpc7,LOC108435597,LOC107678610 coding upstream 545219 5531871 ~ 5596025 (-)
G71319 NA non-coding downstream 4908 4956296 ~ 4980099 (-)
G71316 NA non-coding downstream 30134 4943303 ~ 4954873 (-)
G71315 NA non-coding downstream 43227 4940908 ~ 4941780 (-)
G71308 NA non-coding downstream 45632 4936637 ~ 4939375 (-)
G71305 NA non-coding downstream 49962 4933457 ~ 4935045 (-)
G71325 NA non-coding upstream 4269 4990921 ~ 4993129 (-)
G71322 NA non-coding upstream 14424 5001076 ~ 5043758 (-)
G71327 NA non-coding upstream 32400 5019052 ~ 5020681 (-)
G71328 NA non-coding upstream 41916 5028568 ~ 5089461 (-)
G71338 sfxn1,LOC108275306,LOC108240619,LOC106517750 non-coding upstream 82247 5068899 ~ 5075605 (-)
trnaw-cca_42 NA other downstream 60936 4924000 ~ 4924071 (-)
G71235 NA other downstream 100519 4882170 ~ 4884488 (-)
G71175 NA other downstream 571996 4411948 ~ 4413011 (-)
LOC103042226 LOC108274609,LOC107701883,LOC100536156,LOC107747745,LOC107574915,LOC108442488 other downstream 1136383 3736626 ~ 3848624 (-)
LOC103023864 NA other downstream 1281256 3575561 ~ 3703751 (-)
G71458 atp7a,LOC107554685,LOC107684827,LOC107745084,LOC107559604 other upstream 485014 5471666 ~ 5476375 (-)
LOC103035656 LOC103035656,LOC108414340,LOC108274783 other upstream 842969 5829621 ~ 5841707 (-)
G71771 NA other upstream 1790587 6777239 ~ 6824756 (-)
G71826 NA other upstream 2070458 7057110 ~ 7057643 (-)
G71862 NA other upstream 2323123 7309775 ~ 7312926 (-)

Expression


Co-expression Network