G71327


Basic Information

Item Value
gene id G71327
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 5019052 ~ 5020681 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU96243
TCCATGAgtctctctacactctactgttcttgatctaatctgaagctacatgaagtttggaggtgtgtagtgattggtgtagtgactctgcagaaagttgatgaactctgtgcactatgctccttAGCATCCGCTGACCCggttctgttattttacactgacagagcacagagtcgctgttgttctcagtctcttccactgtgttataatatcactgacagttggctgtggaatatttagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96243 True 241 lncRNA 0.43 2 5019052 5020681

Neighbor

gene id symbol gene type direction distance location
LOC103041488 NA coding downstream 5185 4958105 ~ 5013867 (-)
LOC111193075 NA coding downstream 43427 4961589 ~ 4975625 (-)
LOC103026470 LOC108435611 coding downstream 556080 4447172 ~ 4462972 (-)
LOC103042532 LOC108442489 coding downstream 1108523 3862118 ~ 3910529 (-)
LOC103024174 LOC108442487 coding downstream 1510056 3461237 ~ 3508996 (-)
nudcd2 nudcd2 coding upstream 109921 5130602 ~ 5137613 (-)
LOC103044536 LOC108435599,LOC564855,LOC107684857,LOC103391210,LOC103359223 coding upstream 391035 5411716 ~ 5422882 (-)
gstp1 gstp1 coding upstream 479334 5500015 ~ 5511729 (-)
trpc3 trpc7,LOC108435597,LOC107678610 coding upstream 511190 5531871 ~ 5596025 (-)
LOC103036182 cxxc5b,LOC103036182,LOC108444528,LOC107758529,LOC108274782,LOC107589097 coding upstream 750106 5770787 ~ 5800724 (-)
G71325 NA non-coding downstream 25923 4990921 ~ 4993129 (-)
G71324 NA non-coding downstream 32400 4985007 ~ 4986652 (-)
G71319 NA non-coding downstream 38953 4956296 ~ 4980099 (-)
G71316 NA non-coding downstream 64179 4943303 ~ 4954873 (-)
G71315 NA non-coding downstream 77272 4940908 ~ 4941780 (-)
G71328 NA non-coding upstream 7887 5028568 ~ 5089461 (-)
G71338 sfxn1,LOC108275306,LOC108240619,LOC106517750 non-coding upstream 48218 5068899 ~ 5075605 (-)
G71361 NA non-coding upstream 135937 5156618 ~ 5230814 (-)
G71396 NA non-coding upstream 302663 5323344 ~ 5323642 (-)
G71464 gdf9 non-coding upstream 469682 5490363 ~ 5491941 (-)
trnaw-cca_42 NA other downstream 94981 4924000 ~ 4924071 (-)
G71235 NA other downstream 134564 4882170 ~ 4884488 (-)
G71175 NA other downstream 606041 4411948 ~ 4413011 (-)
LOC103042226 LOC108274609,LOC107701883,LOC100536156,LOC107747745,LOC107574915,LOC108442488 other downstream 1170428 3736626 ~ 3848624 (-)
LOC103023864 NA other downstream 1315301 3575561 ~ 3703751 (-)
G71458 atp7a,LOC107554685,LOC107684827,LOC107745084,LOC107559604 other upstream 450985 5471666 ~ 5476375 (-)
LOC103035656 LOC103035656,LOC108414340,LOC108274783 other upstream 808940 5829621 ~ 5841707 (-)
G71771 NA other upstream 1756558 6777239 ~ 6824756 (-)
G71826 NA other upstream 2036429 7057110 ~ 7057643 (-)
G71862 NA other upstream 2289094 7309775 ~ 7312926 (-)

Expression


Co-expression Network