G71527


Basic Information

Item Value
gene id G71527
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 5824434 ~ 5828822 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU96489
actgaactcacacagtaaacaataaactcacacagtaaacaataaactcacacagtaaacactgaactcacacacagtaaacactgaactcacacacagtaaacactgaactcacacagtaaacaataaactcacacagtaaacaataaactcacacagtaaacactgaactcacacacagtaaacactgaactcacacagtaaacaataaactcacacagtaaacactga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96489 True 231 lncRNA 0.36 3 5824434 5828822

Neighbor

gene id symbol gene type direction distance location
LOC103037091 NA coding upstream 93119 5696919 ~ 5731315 (+)
LOC103044251 NA coding upstream 329870 5491422 ~ 5494564 (+)
LOC103038898 NA coding upstream 339270 5480388 ~ 5485164 (+)
atp7a atp7a,LOC101485317 coding upstream 348003 5430689 ~ 5476431 (+)
atp10b NA coding upstream 416419 5339650 ~ 5408015 (+)
tmem173 NA coding downstream 133458 5962280 ~ 5987766 (+)
LOC103031741 NA coding downstream 179739 6008561 ~ 6011401 (+)
trnaa-agc_14 NA coding downstream 207980 6036802 ~ 6036874 (+)
trnaa-agc_15 NA coding downstream 208854 6037676 ~ 6037748 (+)
LOC103031423 NA coding downstream 443394 6272216 ~ 6291384 (+)
G71490 NA non-coding upstream 216488 5607718 ~ 5607946 (+)
G71489 NA non-coding upstream 221113 5603120 ~ 5603321 (+)
G71473 NA non-coding upstream 291465 5527996 ~ 5532969 (+)
G71474 NA non-coding upstream 292139 5528455 ~ 5532295 (+)
G71411 NA non-coding upstream 414121 5409031 ~ 5410313 (+)
G71528 LOC103035656,LOC108414340,LOC108274783 non-coding downstream 66 5828888 ~ 5841703 (+)
G71567 NA non-coding downstream 137732 5966554 ~ 6018103 (+)
G71566 NA non-coding downstream 183400 6012222 ~ 6014382 (+)
G71608 brd8,LOC107758534 non-coding downstream 203363 6032185 ~ 6036659 (+)
G71611 NA non-coding downstream 257752 6086574 ~ 6086987 (+)
LOC103037414 NA other upstream 145560 5672718 ~ 5678874 (+)
G71414 gstp1 other upstream 318796 5499908 ~ 5505638 (+)
G71247 NA other upstream 844423 4956298 ~ 4980011 (+)
G71249 NA other upstream 856527 4963702 ~ 4967907 (+)
atpif1 atpif1,LOC105912502,LOC107571275,LOC104922170,LOC107730904,LOC103378180 other upstream 902614 4915813 ~ 4921820 (+)
LOC103043949 ppp3cb,LOC108274683,LOC107660165,LOC107758531,LOC107680292,LOC107589094 other downstream 42268 5871090 ~ 5957019 (+)
G71682 LOC108430946,LOC108416517 other downstream 696819 6525641 ~ 6538794 (+)
G71788 LOC105418110,LOC105418502,LOC106676625,LOC102305489,LOC102201812 other downstream 1052765 6881587 ~ 6885541 (+)
LOC103030246 pcdh2ab8,pcdh2ab10,pcdh2ab12,LOC108430950,LOC101884096,LOC108274577,LOC107588388,LOC108430926,LOC108430925,LOC108430922,LOC108275110,LOC108430948,LOC108275111,LOC107588302,LOC107660888,LOC107754492,LOC107655665 other downstream 3040306 8869128 ~ 9036026 (+)
G72281 LOC107754548,LOC108274935,LOC107754545,LOC107754498 other downstream 3314077 9142899 ~ 9149419 (+)

Expression


Co-expression Network