G71554


Basic Information

Item Value
gene id G71554
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 5866305 ~ 5866528 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU96531
ctagtcttgttaaagaccgtaagtgagtggcaagccggttcaataaaggagctgttgagcattcagcatgagtctcacgggtcttccttcctcttccacgccacatttggtgtcagaagtgaccCTGCTGGAAGATATTAAGCTGCTGGCAGGGGAAATCGAACGGCTGAGGAGGAAGACAGCGGACCAACGGTCTAGAGGCAAGGCTCTCCAGCGGAGTGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96531 True 224 lncRNA 0.53 1 5866305 5866528

Neighbor

gene id symbol gene type direction distance location
LOC103035351 ube2d2,UBE2D2,ube2d1,ube2d2l,LOC106611705,LOC105010898,LOC100695155 coding downstream 6935 5844641 ~ 5859370 (-)
LOC103036182 cxxc5b,LOC103036182,LOC108444528,LOC107758529,LOC108274782,LOC107589097 coding downstream 65581 5770787 ~ 5800724 (-)
trpc3 trpc7,LOC108435597,LOC107678610 coding downstream 270280 5531871 ~ 5596025 (-)
gstp1 gstp1 coding downstream 354576 5500015 ~ 5511729 (-)
LOC103044536 LOC108435599,LOC564855,LOC107684857,LOC103391210,LOC103359223 coding downstream 443423 5411716 ~ 5422882 (-)
LOC103032061 LOC108436848,LOC107680293 coding upstream 145691 6012219 ~ 6036754 (-)
LOC103043333 LOC108442486,LOC108275354 coding upstream 295127 6161655 ~ 6221853 (-)
hars hars,LOC106611772,LOC107660169 coding upstream 427156 6293684 ~ 6315841 (-)
LOC103036141 LOC108430946 coding upstream 655529 6522057 ~ 6538782 (-)
LOC103027842 LOC108430992,LOC104947123,LOC107094991,LOC106517448,LOC103354384,LOC106905160,LOC108240514 coding upstream 704288 6570816 ~ 6583742 (-)
G71501 NA non-coding downstream 186195 5679805 ~ 5680110 (-)
G71496 NA non-coding downstream 187432 5642890 ~ 5678873 (-)
G71488 NA non-coding downstream 266353 5599714 ~ 5599952 (-)
G71472 NA non-coding downstream 338431 5527659 ~ 5527874 (-)
G71464 gdf9 non-coding downstream 374364 5490363 ~ 5491941 (-)
G71577 NA non-coding upstream 88092 5954620 ~ 5967921 (-)
G71612 NA non-coding upstream 220311 6086839 ~ 6087111 (-)
G71636 NA non-coding upstream 287363 6153891 ~ 6178020 (-)
G71644 NA non-coding upstream 405723 6272251 ~ 6291512 (-)
G71646 trappc11 non-coding upstream 451701 6318229 ~ 6320682 (-)
LOC103035656 LOC103035656,LOC108414340,LOC108274783 other downstream 24598 5829621 ~ 5841707 (-)
G71458 atp7a,LOC107554685,LOC107684827,LOC107745084,LOC107559604 other downstream 389930 5471666 ~ 5476375 (-)
trnaw-cca_42 NA other downstream 942234 4924000 ~ 4924071 (-)
G71235 NA other downstream 981817 4882170 ~ 4884488 (-)
G71175 NA other downstream 1453294 4411948 ~ 4413011 (-)
G71771 NA other upstream 910711 6777239 ~ 6824756 (-)
G71826 NA other upstream 1190582 7057110 ~ 7057643 (-)
G71862 NA other upstream 1443247 7309775 ~ 7312926 (-)
LOC103027657 LOC108430978 other upstream 1684657 7551185 ~ 7590554 (-)
LOC103030515 wu:fb13g09,LOC108441781,LOC108274673,LOC107554714,LOC107716370,LOC107677527 other upstream 1907367 7773895 ~ 7842280 (-)

Expression


Co-expression Network