G71712


Basic Information

Item Value
gene id G71712
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 6627067 ~ 6633649 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU96776
TTTCTCATTCTTGATCATAAGAGTAAAACATTCcacacaatacaaaaataaatacacactacAGAGACTTCTCTGCATgtagtctttttttctttataaaaatgaCAGATTAGTAAAGCACAGTGAAGAAGAGCTATATTTGAAAAACCTCCTGTTTAAACGTTTAAAAGATAATACAGTATTAGAAGGCAGTTCACAGTCTTTAATGATAGATCTCTTTTTGACAGCTGGTGAAAAACATTGTATGTAATATtgtatgtctttctctctcacaaacacacacacacacacacacacacacacacaatatacaaaaGTGCAACACAATCATACACACGCACATTCTCTCACAATGATGTCCCCTTCTGGCATTCTTCTTCActcttctgtttgtttatgcttTGACCTCCATTAATGCCccgtttctctttttctcctgatTGGTTACCACAGTCCGTATTCTCAGAGGGTTTTTTTGCTTCTTTCTGCTCGTCTGGGAGCTGGAGGAACTGGGGCAGCTCCAGCTGCTCTTTGGTCAGTAAACCACGCTGGTCATCCACCCTACTGCACTGAGCTCGGTTCAGCATCTCCACCAGACCATCCATTTCATGCATTCTTCTGGGCTTGGCACTCGTTCTGGCCACGTCTGGAGCTGGACCTGTTCTCACCTCACCAGCATTTTTGACTCGGTCCAGACAGAGGGTCTTGTTGGCCAGACGTAAGACGCTGGTGCTCAAGTTTAACGGTTCTTTTGATCCATTcatagTGACGACAACGTCCTGCGGTCGGAGGTTGTGTTTCTGGAGAAAAGGCGTGATAGCGTCTCCCACAGTTTTACTAGACTTTGCCATGATTCCTGATGTCTTCCCTGTGAACACGACCTCCAGCGTAAATGTCACTTTGAGTTCCAGGTGGACTTGCTGATCCCGGAGTATAGAACTGTCCTGGTCTAAAGAGAGAGGCTGCaacagaaaataacaaatgattacacacaaacacaaacacctcAGCATCCCATACAACGACCCAGTTACACAAaactataccacagttagttccaaccctgcaatgtgctgagaggcattttatgagtgccattatcagccggtaatgcactgtaaccgaagctctccttGTATttctccaccacatacaggtaaactagcaatgatgcagtgcttacaaaccaaatacaaaccaaatgtgatGCCACTGTACACCACTGGAagccgctggatcccatagaggcacagtgcagaaacgccaTGTCTCGAATAGGCAGCGCAGGCAAAGACgcggtcccacaaataaataagcccagcgattcgaaaaaacacattattacacatattatCAGCCactaatatcaggttaagagttgttattattaaaataaaagcatatgtctatatattttccagttaatatagtgtattttaagctgaatataATGTGGCCGAAAATAGGGGATCCTTGTAATTCTGCAGGTCTTACCATTGGGGGGGTAAGCaaggtaaacaaaactttaattcttaaaaaaaaaacattttctttcaaagtcaaacgagccttggactttactcacccaaataaacagttttcaggagagaaatctgtgtgattAAAGCTCtaacgtttatttacagtaagcttagatttccacaatttttacTGAAACGGACGAAAATAGAAGCCACCAcgctaacctagcaacaatgcagcgcttacagcAATGGAACAATTTTAACACGCatagtgtttataaccaaacaaaatctcaaaaatctttcaataaaagagtgataatggaactgtggtataatcgcaataatacactcgaggttcgtgctatgtCTCAAGcatctgtgtatttttttttcttataatttttcccattttttctccccaatttacacggccaattacccaacccactcattaggactccccctattactagtaatgccccaacacaccaggagggtgaagactag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96776 True 1994 lncRNA 0.41 5 6627067 6633649

Neighbor

gene id symbol gene type direction distance location
LOC103026932 NA coding downstream 33943 6585674 ~ 6593124 (-)
LOC103027842 LOC108430992,LOC104947123,LOC107094991,LOC106517448,LOC103354384,LOC106905160,LOC108240514 coding downstream 43325 6570816 ~ 6583742 (-)
LOC103036141 LOC108430946 coding downstream 88285 6522057 ~ 6538782 (-)
hars hars,LOC106611772,LOC107660169 coding downstream 311226 6293684 ~ 6315841 (-)
LOC103043333 LOC108442486,LOC108275354 coding downstream 405214 6161655 ~ 6221853 (-)
LOC103025929 adra2da,LOC108430987,LOC105904584,LOC107667592,LOC107757419 coding upstream 230375 6864024 ~ 6868262 (-)
LOC103025318 LOC108430942 coding upstream 315927 6949576 ~ 6956193 (-)
LOC103024994 stc2a,stc2,LOC108430941,LOC108274458,LOC107677705 coding upstream 351569 6985218 ~ 7006934 (-)
LOC103022894 drd1a,LOC108430983,LOC108274482,LOC107553333,LOC107677717,LOC107598377 coding upstream 627332 7260981 ~ 7265921 (-)
kif3a kif3a coding upstream 791034 7424683 ~ 7444873 (-)
G71708 NA non-coding downstream 14122 6605271 ~ 6612945 (-)
G71704 NA non-coding downstream 60952 6561124 ~ 6566115 (-)
G71697 LOC108430994 non-coding downstream 128769 6493631 ~ 6498298 (-)
G71675 LOC108430995,LOC108274926 non-coding downstream 167436 6455555 ~ 6459631 (-)
G71665 NA non-coding downstream 252854 6368756 ~ 6374213 (-)
G71755 NA non-coding upstream 80492 6714141 ~ 6732589 (-)
G71766 NA non-coding upstream 121783 6755432 ~ 6863292 (-)
G71790 LOC105418110,LOC105418502,LOC106676625,LOC102305489,LOC102200059 non-coding upstream 247883 6881532 ~ 6885591 (-)
G71793 NA non-coding upstream 277765 6911414 ~ 6911709 (-)
G71817 NA non-coding upstream 302149 6935798 ~ 6936080 (-)
LOC103035656 LOC103035656,LOC108414340,LOC108274783 other downstream 785360 5829621 ~ 5841707 (-)
G71458 atp7a,LOC107554685,LOC107684827,LOC107745084,LOC107559604 other downstream 1150692 5471666 ~ 5476375 (-)
trnaw-cca_42 NA other downstream 1702996 4924000 ~ 4924071 (-)
G71235 NA other downstream 1742579 4882170 ~ 4884488 (-)
G71175 NA other downstream 2214056 4411948 ~ 4413011 (-)
G71771 NA other upstream 143590 6777239 ~ 6824756 (-)
G71826 NA other upstream 423461 7057110 ~ 7057643 (-)
G71862 NA other upstream 676126 7309775 ~ 7312926 (-)
LOC103027657 LOC108430978 other upstream 917536 7551185 ~ 7590554 (-)
LOC103030515 wu:fb13g09,LOC108441781,LOC108274673,LOC107554714,LOC107716370,LOC107677527 other upstream 1140246 7773895 ~ 7842280 (-)

Expression


Co-expression Network