G72183


Basic Information

Item Value
gene id G72183
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 8401246 ~ 8401478 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU97364
caatgccatgtgctcaaaaaagcacatggctggaaacacaagacaggaaaacagggcaggagcacagaaaaccaaaagagggaaaaacacaggacagacaggctaatatgtgacagTCTGTTCTTGGATTGTCTCATTGGCCAAACCAAAAGGCCAAAAGGAGAGACACTCGCACATACCAAACAAACAATTTAaaagaggggtatttatactaaacagaccaggtgtgagca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU97364 True 233 lncRNA 0.43 1 8401246 8401478

Neighbor

gene id symbol gene type direction distance location
mars2 mars2 coding upstream 675433 7719880 ~ 7725813 (+)
LOC103027348 LOC103027348,LOC108430938 coding upstream 726583 7671558 ~ 7674663 (+)
LOC103027052 LOC108430977 coding upstream 748756 7612712 ~ 7652490 (+)
LOC103023202 NA coding upstream 1188750 7206477 ~ 7212496 (+)
LOC103023840 cpeb4,LOC108430986 coding upstream 1227698 7139036 ~ 7173548 (+)
spock1 spock1,LOC107747099,LOC107655663 coding downstream 38659 8440137 ~ 8641348 (+)
LOC103031395 etf1,LOC108430956,LOC108275025 coding downstream 273371 8674849 ~ 8687469 (+)
LOC103028966 fbxw11a,LOC108430955,LOC105893085,LOC108275024,LOC107655672,LOC107588312,LOC107754486,LOC107747095 coding downstream 290472 8691950 ~ 8726635 (+)
LOC103033931 si:ch73-233f7.1,LOC108430952,LOC107596359,LOC107588310,LOC107754489,LOC107660897,LOC108274507 coding downstream 408550 8810028 ~ 8819533 (+)
LOC103031822 LOC108430951,LOC108275060,LOC107754491,LOC107747094,LOC107596358,LOC107655671,LOC107660898,LOC108275059,LOC107754490 coding downstream 425036 8826514 ~ 8857516 (+)
G72175 NA non-coding upstream 8769 8392261 ~ 8392477 (+)
G72171 NA non-coding upstream 14490 8385675 ~ 8386756 (+)
G72011 NA non-coding upstream 189043 8146629 ~ 8212203 (+)
G72009 NA non-coding upstream 359275 8041047 ~ 8041971 (+)
G72001 NA non-coding upstream 516522 7867242 ~ 7884724 (+)
G72192 NA non-coding downstream 18586 8420064 ~ 8420305 (+)
G72202 NA non-coding downstream 36392 8437870 ~ 8438095 (+)
G72209 NA non-coding downstream 82445 8483923 ~ 8484763 (+)
LOC111193079 NA non-coding downstream 383094 8784572 ~ 8793176 (+)
G72278 NA non-coding downstream 688398 9089876 ~ 9090618 (+)
G71788 LOC105418110,LOC105418502,LOC106676625,LOC102305489,LOC102201812 other upstream 1515705 6881587 ~ 6885541 (+)
G71682 LOC108430946,LOC108416517 other upstream 1862452 6525641 ~ 6538794 (+)
LOC103043949 ppp3cb,LOC108274683,LOC107660165,LOC107758531,LOC107680292,LOC107589094 other upstream 2444227 5871090 ~ 5957019 (+)
LOC103037414 NA other upstream 2722372 5672718 ~ 5678874 (+)
G71414 gstp1 other upstream 2895608 5499908 ~ 5505638 (+)
LOC103030246 pcdh2ab8,pcdh2ab10,pcdh2ab12,LOC108430950,LOC101884096,LOC108274577,LOC107588388,LOC108430926,LOC108430925,LOC108430922,LOC108275110,LOC108430948,LOC108275111,LOC107588302,LOC107660888,LOC107754492,LOC107655665 other downstream 467650 8869128 ~ 9036026 (+)
G72281 LOC107754548,LOC108274935,LOC107754545,LOC107754498 other downstream 741421 9142899 ~ 9149419 (+)
LOC103043718 LOC103043718,LOC108442465 other downstream 1567028 9968506 ~ 9970042 (+)
G72621 NA other downstream 1677101 10078579 ~ 10082140 (+)
LOC103022150 brsk2a,brsk2b,LOC107707552,LOC107675281,LOC107600443 other downstream 1871441 10272919 ~ 10626964 (+)

Expression


Co-expression Network