G72312


Basic Information

Item Value
gene id G72312
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 8376087 ~ 8376585 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU97529
ATGAGAGTAGTCAGAAAGATCGGAAAAAAAGCCCCTAGTCACTCTTGACTGGCCTTTTTAAAGATGCCTCGTGCATACAGGAGGAAGGATGCTGAACAGATGTTCTCTTGAAAAGAGGAACCGAAAACGCACGAATAAGCAAAAGTcaagaataattcataaatcagaaAGCTCTATTTACTATGACAAAACAGTTTCCAGGCAAACCTCGATTTCCATTCCTTTAGGAGAGAATAATCCATAAATCAGAAAACTCCATTTGCTATGACCCGCTCGTTTCCAGGCAGACCTCTGCTTTTATAATCTTTGCCCTTAAGTCTGAATGAATGGCCTTATCAGAGAATATAAGTTCACATAACACTCAATGATAAAATACAAGAATATAGTGTAATACAAGAATTCATAATCAACTCTGTTACAGGGAGTAATAATACTGATTGAATGAATAATCAGTGTAATTGATTATGAATACATGAAGTAAATGTTGATTTTccctcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU97529 True 499 lncRNA 0.36 1 8376087 8376585

Neighbor

gene id symbol gene type direction distance location
enox2 enox2 coding downstream 201193 7867201 ~ 8174894 (-)
med12 med12,LOC106604460 coding downstream 607726 7726618 ~ 7768361 (-)
LOC103025952 hspa4,LOC108430974,LOC108274676,LOC100380717 coding downstream 657031 7699890 ~ 7719056 (-)
LOC103026262 gnpi1,gnpda1,LOC103026262,LOC108430975,LOC107741117,LOC107664733,LOC107554697,LOC104938351 coding downstream 679179 7690185 ~ 7696908 (-)
LOC103026574 ndfip1,LOC103026574,LOC108430976,LOC107756695,LOC107677723,LOC107664757,LOC107553337,LOC108274678,LOC105903889 coding downstream 690721 7676287 ~ 7685366 (-)
LOC103029481 fgf18a,LOC103029481,LOC108430953,LOC108274431,LOC107747128,LOC107660900,LOC107754488,LOC105893086 coding upstream 358492 8735077 ~ 8758128 (-)
mfsd7 mfsd7 coding upstream 876281 9252866 ~ 9276501 (-)
cplx1 cplx1,LOC107751330,LOC107697630,LOC107660193,LOC107587069 coding upstream 1168353 9544938 ~ 9625510 (-)
LOC103036760 LOC108442475,LOC108275030 coding upstream 1581935 9958520 ~ 9965719 (-)
phrf1 NA coding upstream 1696644 10073229 ~ 10093613 (-)
G72118 NA non-coding downstream 59110 8316651 ~ 8316977 (-)
G72023 NA non-coding downstream 447001 7925394 ~ 7929086 (-)
G72022 NA non-coding downstream 496771 7878679 ~ 7879316 (-)
G71975 NA non-coding downstream 709535 7656662 ~ 7666552 (-)
G71914 NA non-coding downstream 854346 7521532 ~ 7521741 (-)
G72315 NA non-coding upstream 24283 8400868 ~ 8401244 (-)
G72317 NA non-coding upstream 65180 8441765 ~ 8442726 (-)
G72329 NA non-coding upstream 106773 8483358 ~ 8497873 (-)
G72338 etf1,LOC108430956,LOC108275025,LOC107742375,LOC105893093 non-coding upstream 288170 8664755 ~ 8782160 (-)
G72345 fbxw11a non-coding upstream 325298 8701883 ~ 8702315 (-)
LOC103030515 wu:fb13g09,LOC108441781,LOC108274673,LOC107554714,LOC107716370,LOC107677527 other downstream 533807 7773895 ~ 7842280 (-)
LOC103027657 LOC108430978 other downstream 785533 7551185 ~ 7590554 (-)
G71862 NA other downstream 1063161 7309775 ~ 7312926 (-)
G71826 NA other downstream 1318444 7057110 ~ 7057643 (-)
G71771 NA other downstream 1551331 6777239 ~ 6824756 (-)
G72336 NA other upstream 262953 8639538 ~ 8645601 (-)
G72449 pcdh2g29,LOC108438834,LOC108438829,LOC108274931,LOC108438833 other upstream 789293 9165878 ~ 9174309 (-)
G72453 NA other upstream 811814 9188399 ~ 9225559 (-)
elp1 ikbkap,LOC107751344,LOC106611638,LOC105419749 other upstream 1424470 9801055 ~ 9824519 (-)
LOC103042271 LOC108442478,LOC108275244 other upstream 1479814 9856399 ~ 9902893 (-)

Expression


Co-expression Network