G72453


Basic Information

Item Value
gene id G72453
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 9188399 ~ 9225559 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU97707
TTAATGATTTCATaactttttatttgaaatgtcaGTGTtcaagagaaaataaaacagcaatataaATATTAGCATATAAAATAAGTGTAACACTGAGGAGAAGGGGGAGGGGGAGTCTTAGCATTTAATAAGAGGGATGTTACAGTGGGATACAGAGCATTACGGCATtggcagagacacacacacatagataatatttatatttgtttcttCATATAGACATTAGGAAGCAGTCTAGCACATATGCACAATAGAAATCACAAAGGAAAAGGAAAGGCTACAGGAAGTTAGGAGGTTTGTTATTTTTGCGTCTATGCATTTAGGAGTGATCGATCGGAGAAGAAAGtaggagaaaagaaaatgtgaacacaaaaatatatgcaaaaaacTTCACAAGTTTCTAGACTACGTGTGTGCCACTTTCTTTTAAATCCTTAGAAGTTAATCTCTCTATTTACAATCGAGTTAGTGTTGGCCTTCATGTGCTAAAGTACTACTTCTGCAACACATCTCtgagaacattgttttttttagttattttgtttgtttgtttgttttttccccatcattttactataaaaaaaacaaaagtaatgcaACACATTCCAGTAGTAGGCCTGTGTTCCAGGCTTAGAAATCTTATTGGATACTTTTCTTAGTGAACGCATCTTACTCTGTATACTGACTGATATCTATTTACAACAGGTCATGATTTTTTAGCATTGTGTGGACGGATGGGAGGTATGGGGTAAATGATCAGGATTTCCAGCTGAGTGGAGCTTTGGGAACTGGACTGAATGTCCTATTTGCCCCTTCTGAGTGGCACTTCCATGATTGTGGCTTTAGGACTGAGCTTGCTGTTGCTTACTGTTGATTGTTGGGTCACTAAATTCTGAATCATCATTCTGAACTGAGGTTCCTGAAAGTATCTTAACTTAAACAACCAAAAGACTGTTCTTAAATTGTTAGGTGAGCATCACACTgtacactcactctctctacacCAGTTAAGATGATCTATTTAAGATAAAGATACTTTTAGGAGACTCTTGTAGGGCTCAGAACAACAATTGAACACTTTATGGTGTCAAAGCGAAACACTTCCAGTGTTTCTGAAAGATCTTATTTTGGCTCTACTGTACTCTCAGGCAGCTGGTAATTAATGTTATGATGTAATTAATGAtacagtctctctttctctgttacaGTACATGTATCGTGTTTGGCTCTGAACACATAGCATGCCACAAGGCTAGAAGTTACGCATGCACTGGGCTGGTGAAAGCACAATTTGAAGAGcttttgaaattattttaaaaaacttcCCAACTCACTAATGGAGAAGTGAGTCAAGctcaaaaactaaagaaaaaaagaaaaaaggacacAATGGATCGTTTAGAAAAGAGCAATTATTCATCTTCTCATTCTAACATCCAATTGATGCTACAAATGGAGTTGATCTCAAGGGGTTCTTCTCTGTCAAGCAATGCATAGTTACtcctagttttagctttagattTATAAGATGTTTGGCTAAAATgcgtcatgcaaaaaaaaaaggattaccTGTATTATATTCCTTAAAAGCTGAACCCTCACATACTTtgttagattttagatttcatGTATTCCATCAGTGGTAGCCTAGGCACAGCAACAGCTATTTATTTACCTGAAAAGGAAACGATTTgaggaagaagaaagaaaagtgtCAAACATCAGAATCAAATCAAACATCAAAGTGATATATTACAAAAATCAACACTTTTCTTCTGGGTAAGGCCAGGAAATGCAGCACAGGAtatacaaaaagaagaaaaacaaaaactcaaaGCATCAAATCAAATTATCATCAATATAATCATTACTATCATAAGTCATTTTCAACATGATGATCACCACAGGTTAACCCTCTCCCTCAGAGTGAAGAAGTAAAAGCAAGATCACCATCACAAAAGCACTGTGTTATACACCTGATGATGCCATACACGTCAAAGTATTGTCCTTCAAAACGaaacagcaaacaaaacaaagccaacaaaaaaaaaataaaaagtaaaatctcTCCCAACTTCCAAAACATTCAGCTAGACCAGAGGTCTAATGGAACCGTGATTAAATCTCTGTGTGAAAAATTATCCTATCATACgcaacacatactgtataatcaGCCGTGGTATAATACAGGGAATACAGTGAATGAAAGCTAGGACTGGAACAGACGGTGGGCTGTCTTTCTTGCACACACCCACCACAGTCAGAAGTCAAGAGAGTAACAACAAAAAGTGTttcaaaaccaaaaatcaaaataataaagaagACAAAAGAACTCCAGAGGAAGGTGCACATTGATACACTGATGTTTCCTCACTTCCttcttctcattttttccaCATCCTTTAAAGTTCAGTGCACCAAAGCTCACCAATCTCTGAAGCAGCAAGAGAAGAGTAAGCTATGTTCTTCCCTAACtcacctctttctttttctctctctaggtatatttccatccatctatccatCCGTCCTCACTGTCTACCTCATCCAGCACCACCCCTCTGTCTCATTCTCAATCTTTACTTCTTCTCCTTCTTGGTGGACTTCTTCTTGCTGGCAGGTGTCTGGGCCTTTGGTGGTTCAGGCTGGGCGGCAGAGACCTGAGGCGGGGCAGGGCCTGCTGGGGCTGCTGGGGGTTGGCGGTGAGCGTAGCCGTGCTGCCGGGGATGTAGACATTCTGACGGTAGTCGGGGACGTGCTGCAGGGTGAACTGCGGGCTGTAGCGGGTGCTCAAGCCCATGGTGCCCGGACCCAGAGTGTTGGTAGCCTCACTCACTt
>TU97708
TTAATGATTTCATaactttttatttgaaatgtcaGTGTtcaagagaaaataaaacagcaatataaATATTAGCATATAAAATAAGTGTAACACTGAGGAGAAGGGGGAGGGGGAGTCTTAGCATTTAATAAGAGGGATGTTACAGTGGGATACAGAGCATTACGGCATtggcagagacacacacacatagataatatttatatttgtttcttCATATAGACATTAGGAAGCAGTCTAGCACATATGCACAATAGAAATCACAAAGGAAAAGGAAAGGCTACAGGAAGTTAGGAGGTTTGTTATTTTTGCGTCTATGCATTTAGGAGTGATCGATCGGAGAAGAAAGtaggagaaaagaaaatgtgaacacaaaaatatatgcaaaaaacTTCACAAGTTTCTAGACTACGTGTGTGCCACTTTCTTTTAAATCCTTAGAAGTTAATCTCTCTATTTACAATCGAGTTAGTGTTGGCCTTCATGTGCTAAAGTACTACTTCTGCAACACATCTCtgagaacattgttttttttagttattttgtttgtttgtttgtttttttttttcctttatttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU97707 True 2838 TUCP 0.39 2 9222692 9225559
TU97708 False 575 lncRNA 0.33 2 9188399 9225559

Neighbor

gene id symbol gene type direction distance location
LOC103029481 fgf18a,LOC103029481,LOC108430953,LOC108274431,LOC107747128,LOC107660900,LOC107754488,LOC105893086 coding downstream 430271 8735077 ~ 8758128 (-)
enox2 enox2 coding downstream 1013505 7867201 ~ 8174894 (-)
med12 med12,LOC106604460 coding downstream 1420038 7726618 ~ 7768361 (-)
LOC103025952 hspa4,LOC108430974,LOC108274676,LOC100380717 coding downstream 1469343 7699890 ~ 7719056 (-)
LOC103026262 gnpi1,gnpda1,LOC103026262,LOC108430975,LOC107741117,LOC107664733,LOC107554697,LOC104938351 coding downstream 1491491 7690185 ~ 7696908 (-)
mfsd7 mfsd7 coding upstream 27307 9252866 ~ 9276501 (-)
cplx1 cplx1,LOC107751330,LOC107697630,LOC107660193,LOC107587069 coding upstream 319379 9544938 ~ 9625510 (-)
LOC103036760 LOC108442475,LOC108275030 coding upstream 732961 9958520 ~ 9965719 (-)
phrf1 NA coding upstream 847670 10073229 ~ 10093613 (-)
lrrc56 NA coding upstream 940768 10166327 ~ 10184846 (-)
G72447 pcdh2g20,LOC100536800,LOC108192077,LOC107588304,LOC107747110,LOC107655636,LOC107655635 non-coding downstream 23113 9158468 ~ 9165286 (-)
G72446 pcdh2g20,LOC108192077,LOC107655635,LOC107588304,LOC108438834,LOC100536800 non-coding downstream 29485 9149126 ~ 9158914 (-)
G72443 LOC108438833,LOC108438834,LOC108438829,LOC107596372 non-coding downstream 30277 9142470 ~ 9158122 (-)
G72437 LOC107655635,LOC108438829,LOC107754498,LOC108438834,LOC107747110,LOC107754548,LOC108438831,LOC108274935,LOC107655634 non-coding downstream 44992 9122644 ~ 9143407 (-)
G72436 NA non-coding downstream 61805 9116960 ~ 9126594 (-)
G72482 NA non-coding upstream 357790 9583349 ~ 9583897 (-)
G72483 NA non-coding upstream 377716 9603275 ~ 9605540 (-)
G72497 NA non-coding upstream 481823 9707382 ~ 9709185 (-)
G72508 NA non-coding upstream 524891 9750450 ~ 9750692 (-)
G72524 NA non-coding upstream 557761 9783320 ~ 9783821 (-)
G72449 pcdh2g29,LOC108438834,LOC108438829,LOC108274931,LOC108438833 other downstream 14090 9165878 ~ 9174309 (-)
G72336 NA other downstream 542798 8639538 ~ 8645601 (-)
LOC103030515 wu:fb13g09,LOC108441781,LOC108274673,LOC107554714,LOC107716370,LOC107677527 other downstream 1346119 7773895 ~ 7842280 (-)
LOC103027657 LOC108430978 other downstream 1597845 7551185 ~ 7590554 (-)
G71862 NA other downstream 1875473 7309775 ~ 7312926 (-)
elp1 ikbkap,LOC107751344,LOC106611638,LOC105419749 other upstream 575496 9801055 ~ 9824519 (-)
LOC103042271 LOC108442478,LOC108275244 other upstream 630840 9856399 ~ 9902893 (-)
LOC103037069 LOC103037069,LOC108442462,LOC101069290,LOC107675263,LOC107562830,LOC107707530,LOC107085412,LOC101171241,LOC103151621 other upstream 826393 10051952 ~ 10054034 (-)
LOC103046452 rassf7 other upstream 876214 10101773 ~ 10162484 (-)
LOC111193093 NA other upstream 1999220 11224779 ~ 11225954 (-)

Expression


Co-expression Network