G72621


Basic Information

Item Value
gene id G72621
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 10078579 ~ 10082140 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU97933
TGCTCATTTTTTCTGGTGGAGGACCCTCAGGTTCTTGTATGTTCCAGGTAACTCGTTTTCCCTGCGATTTGGCCTTAGTACCTCCGATTACTAAAGCTGGCTCTATCTCCTGCTTTGCCCCTCCTGAGACCTCCTTCATGAGAGTAGGAGGCTCTGCAGAACCTGGAGGATCAGTGACAGAATCCTCCTCCTTTAACTCCTTTTTAATGAAGTCCAAGTTGTCAATTAAGTAGTCCACATTGATATCTTCATCTGACGAGTCCACAGGTTCTTGCTTCACAGGGCATGGTGTCTGGATGGGTACTACCTCCATCTCTTCCTTTTCCACCACAGGCAGGCTTGTCAGTTCACCATCAGGCTCTTTATCATATTCCACAGGAGTAGGGTCAGGTGTGGACAAATTAATGACGAGAGCACTATCACTGCAGGggtcattattatcatcatcatcatcatcatcaaaaaccaccaccaccactatcatcatcttcatcaggcCAAATCTGCTCTATTTTGACTTGTTTTGGAGGTTCTATAATGTCATGCGTACTTTTGTCTTCCTGATGTAATAAGTGACTGGTCTGGTTACTGGGTGTAGATGCTTTCATAATACAAATGTCATTCAATTCTTGGGATGTTTTGGGGACACCTGAGGTAGTGagttcttcttttttaatttcatcTGGCTTCAGTAATTCTTCAAACAATGTATTGCTTTGTTCAGTCTCTACTTTTATATCTTTTTGCAGTTGGGCCTCTTCAGCCTCACTAAGTGTGCAGGTGTTTTCTAGTTTGATTTCTTTGGGTTTGGCTGGCTGTCGTTCGTTTGTCATAACAACTGAAGAAGTCTCCTTGGTGTTTGCATCGGTTAGATCAATTGATGCTGAACAGCCAAGACTCCTGGGTTCATTCTCCTTTTTAATGGACGCAACAGAAATTCCAGTCTCACACTGCTCTTCTCCAGACTCTGTTTCCTTCTTCAGTGCCACTACATTTTTCTTCAAACTGTAAACTGTCTCTTTTGCCTCAGTTGCAGTGGACACTAATGATTTGTTGCGGCTTCTTTCTTTCTGATGAAGgacctcactctttctttctgaaGAAGACACATCCACTCTTCGCCTCTGCTCTCTGGAGCTTGATCTAGACCTTCTCCTTTTGGACCTCACATCACCTCCATCCTTTGATGCTGTAGATGACCTGTGTGATGATGGTTGCTCTCTCCTCCTCTCGATGGACCTTGATCTAGTTCTGGAGCGAGAGCGCCTTTTTTCCTTGGATCTCTTGTTTCCATCTTTCCCCTTGCCGTCGTAACGTTCACGGCTGCTGCGCTTTGCTTTTTTCTTCCGAGAGCTCTCATCGCTGCTGGAGCGAGCAGAGCGCCGCTTGTCTTGAGACCGTTTTCTTTCTTTAGATATAGAGCGAGAGCTTCTTTTGTCTCTAGATCTTGAACGAGACCGTCTTTTGTCTTTAGACCTCGAACGAGAGCGCCTTTTGTCTCTAGATTGTCTTTCTTTAGACCTTGAGCGAGACCGCCTGCGGACTGGAGATCTAGATCGTGAGCGCCTTCTGTCTTTAGATCTCGAGCGAGAACGTCTTCTGTCTTTAGATCTCGAGCGAGAACGTCTTTTTTCTATAGATCTCGAGCGAGAACGTCTTTTTTCTTTAGACCTTGAGCGAGAACGTCTTTTTTCTTTAGATCTTGAGCGAGAACGTCTTTTCTCTTTAGATTTCGAACGGgagcttcttttttctttcgaTCTTGAGCGAGAACGCCTTCTTTCTTTAGATCTAGAACGAGAATGTCTTTTCTTCTTAGATCTTGAGCGAGAACGCCTTCTTTCTTTAGACCTTGACCGAGAACGCATTTTCTCTTTAGATCTTGAGCGAGACCGTCTACAGCCTGGAGATCTAGAGCTTGATCGCTTTTTTTCTTCTGACCATGAGTGTTCATTCTCTTCAGGAGAGCTTTCCATGTCCTTGGAAGGAGAGCTCTGGGAAGCAGACTCTGCCTCTACGCTCTCCTCCTTAGGCTGGAAGCATGGTGATGCtattctttcttcctttcttttgtgTATTACAGCAGAGCTGCTTGCCACTGATGGTTCTTCATCACAAAGACCATTCCCTTTGGGGACTTCTGGCTCAGAAGTGGCCTTCACAGGTGATGGCTCATCTTCTGGTTCAGCTTTTATCTCTATTTTGACCTTTTCATCACTGTGTTGACTAGAGGTTGAGCTTGACCTGGACCGATCCATAGATTTGGTAAATGGGCTTTCAGGAGTTGCACTACGCTCAGTATCAGAGATTGCAGGGCTTCCACTATATGCCATAACAGCGGCAAGACCCTCAGACTGCATTTGTCTATGTCCAGTAGCAAAACGTTGTAAAGGCTTTGGCCAGGGGTCTTCCTTGAATGAAGTAGGCTCCTTTTTAACTTGGATACCCATTCCAGAGCTTTCTTCCACATCAAAGTCCATGGGTTCTGTTTTAATCTGCAGTTTTACACTTTCATTTTGTCCCATGCTTGATGGCATGGAAGCATTACTTTGGGAATCCATCTCAGAGGAATCATTCTCAGTTTCACTCTCTGACGAATCAGATCCTGTAGGATTGAAAGGATCATAGACCTCACTCTTCACTGATGCCTTTTTAGTTTGGGAATGGGACAAGAGCAACATCTGCTTGTCTTTCTGTGTTCTTTTTGCAGATTCTTCATCTTTTACACCACTTGGCTCAGGTGCAGAAAGACGCCGGGCATGCCACGGATTCCCACTAGCATTAATGCGAAAACTAATagcagatgatgatgatgacgatgaagATCGCATATTTGACGTCACACTGCTCGATGATGAGGAAGTGGAAAAAGAATTAGAAAAAGAGGATGAAGGTCCGGGTCTGTCTAGTCTCTGTCTATGGCTGTCTGCTGTCCTACTCTGTCGACTCGAACCTGCCCTCTGCTGGTCAACGGTATGTTGCCGGCCTTTGTCACCTGCTAAACTTGTCATAGAAGACTCTGGTAAGTTATTGCTATTACTCCCTCTGCTGCTTTGTGCTTCAGAACTGTTTTCCCTTTTAATCTTTGGTATTCTTGGTAAAACAGACACATCTACCCATACTGGCTTGGGTGGAGGCTTTTTTGCAGGGATCTGTTGAGGTGCATCTCCCCTCTCCCTGTGGCGAGAGTCAGAAGATCCATTTGGAACACGTGTTGGGGGTTGGCCTCTGATCCCACAGGTACCCTGCAGACTGTGATCGGTTCCAACAGTGTGTGAGGGCCCCGGCCTGTGGGGCAGTGGCGTATGCAGACGTGGGTGCCCAGGAACAGGCACAGGTGTGCGTAATGTGGGTTGAGAGGGCGACACAGGTGTCAGTGGAGAAGGACTGTGTAATGAAGGTCTTCTTAAGGGGGTGGATGAGGAGGAAGCAGGGGGAGTCTGTCTGATTGACTGAATAGGACTTGCTCCTGTAGATGTGATGCCGGACTCTTCTGAAGTAGAACCACTTGAGATGCTTCTTGGCAAAGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU97933 True 3532 TUCP 0.46 2 10078579 10082140

Neighbor

gene id symbol gene type direction distance location
irf7 NA coding upstream 5478 10065416 ~ 10073101 (+)
thg1l thg1l,LOC103154062,LOC106912903,LOC107751338 coding upstream 100755 9974224 ~ 9977824 (+)
LOC103044029 LOC108442474,LOC108275029,LOC107680923,LOC107660187,LOC107587072 coding upstream 121051 9910406 ~ 9957528 (+)
tbc1d2 tbc1d2 coding upstream 225522 9827287 ~ 9853057 (+)
LOC103043406 smu1,LOC108442464,LOC106604632,LOC107082371,LOC108243958,LOC103353869,LOC102223743 coding upstream 279116 9791271 ~ 9799463 (+)
hras hras,rash,LOC107562835,LOC103357265 coding downstream 103597 10185737 ~ 10206122 (+)
LOC103047796 NA coding downstream 125569 10207709 ~ 10212496 (+)
tsg101 tsg101,tsg101a coding downstream 130423 10212563 ~ 10221827 (+)
igsf22 igsf22 coding downstream 893581 10975721 ~ 11000591 (+)
spty2d1 spty2d1 coding downstream 947346 11029486 ~ 11034828 (+)
G72617 NA non-coding upstream 19693 10058685 ~ 10058886 (+)
G72615 NA non-coding upstream 20761 10057483 ~ 10057818 (+)
G72612 NA non-coding upstream 49733 10028483 ~ 10028846 (+)
G72606 NA non-coding upstream 100157 9977975 ~ 9978422 (+)
G72514 NA non-coding upstream 304980 9773199 ~ 9773599 (+)
LOC111193092 NA non-coding downstream 15119 10097259 ~ 10099145 (+)
G72752 NA non-coding downstream 715852 10797992 ~ 10798845 (+)
G72753 NA non-coding downstream 717406 10799546 ~ 10801772 (+)
G72766 NA non-coding downstream 926409 11008549 ~ 11015607 (+)
G72871 NA non-coding downstream 1102526 11184666 ~ 11184981 (+)
LOC103043718 LOC103043718,LOC108442465 other upstream 108537 9968506 ~ 9970042 (+)
G72281 LOC107754548,LOC108274935,LOC107754545,LOC107754498 other upstream 929160 9142899 ~ 9149419 (+)
LOC103030246 pcdh2ab8,pcdh2ab10,pcdh2ab12,LOC108430950,LOC101884096,LOC108274577,LOC107588388,LOC108430926,LOC108430925,LOC108430922,LOC108275110,LOC108430948,LOC108275111,LOC107588302,LOC107660888,LOC107754492,LOC107655665 other upstream 1042553 8869128 ~ 9036026 (+)
G71788 LOC105418110,LOC105418502,LOC106676625,LOC102305489,LOC102201812 other upstream 3193038 6881587 ~ 6885541 (+)
G71682 LOC108430946,LOC108416517 other upstream 3539785 6525641 ~ 6538794 (+)
LOC103022150 brsk2a,brsk2b,LOC107707552,LOC107675281,LOC107600443 other downstream 190779 10272919 ~ 10626964 (+)
LOC103043719 NA other downstream 2789344 12871484 ~ 12897931 (+)
G73533 NA other downstream 4566689 14648829 ~ 14649551 (+)
rpgrip1l rpgrip1l other downstream 4809394 14891534 ~ 14921003 (+)
svip svip other downstream 5490162 15572302 ~ 15577533 (+)

Expression


Co-expression Network