G72633


Basic Information

Item Value
gene id G72633
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 9990196 ~ 9990507 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU97946
cagtaggtaaaaaaaatagtcaagcatcacaaatgcaatacagtaacattctgactactctgtgtcactcccctctctccatcaccttcctggccatccatccgctgcagtctgtttggccataaattctcatcaacattgcatctgatgtgttctttagcaatgcactgtgggaagaatgcctgagccatcctctacactgatcgccacaggactatataatcattatatcatCACAGGACTATATCATCGTTATATAATCACAGGACTAGCATCAAAGAACTAGCACCAGGCCAAGATGTATACAGTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU97946 True 312 lncRNA 0.42 1 9990196 9990507

Neighbor

gene id symbol gene type direction distance location
LOC103036760 LOC108442475,LOC108275030 coding downstream 24477 9958520 ~ 9965719 (-)
cplx1 cplx1,LOC107751330,LOC107697630,LOC107660193,LOC107587069 coding downstream 364686 9544938 ~ 9625510 (-)
mfsd7 mfsd7 coding downstream 713695 9252866 ~ 9276501 (-)
LOC103029481 fgf18a,LOC103029481,LOC108430953,LOC108274431,LOC107747128,LOC107660900,LOC107754488,LOC105893086 coding downstream 1232068 8735077 ~ 8758128 (-)
enox2 enox2 coding downstream 1815302 7867201 ~ 8174894 (-)
phrf1 NA coding upstream 82722 10073229 ~ 10093613 (-)
lrrc56 NA coding upstream 175820 10166327 ~ 10184846 (-)
LOC103047177 ldha,LOC103047177,LOC108442466,LOC107558315,LOC107707550 coding upstream 232611 10223118 ~ 10233197 (-)
abtb2 abtb2,abtb2b,LOC107675288,LOC107688574 coding upstream 640339 10630846 ~ 10717984 (-)
b4galnt4 b4galnt4,LOC108439245 coding upstream 735017 10725524 ~ 10965182 (-)
G72596 LOC107751334,LOC107746538,LOC107680923,LOC107551454 non-coding downstream 32670 9955081 ~ 9957526 (-)
G72526 smu1,LOC108442464,LOC107082371,LOC106604632,LOC102223743,LOC108275199,LOC108243958 non-coding downstream 190793 9788501 ~ 9799403 (-)
G72524 NA non-coding downstream 206375 9783320 ~ 9783821 (-)
G72508 NA non-coding downstream 239504 9750450 ~ 9750692 (-)
G72497 NA non-coding downstream 281011 9707382 ~ 9709185 (-)
G72689 tsg101,tsg101a non-coding upstream 222073 10212580 ~ 10221634 (-)
G72802 NA non-coding upstream 577397 10567904 ~ 10625271 (-)
G72803 NA non-coding upstream 580657 10571164 ~ 10627025 (-)
G72806 NA non-coding upstream 638690 10629197 ~ 10629486 (-)
G72807 NA non-coding upstream 639075 10629582 ~ 10629824 (-)
LOC103042271 LOC108442478,LOC108275244 other downstream 87303 9856399 ~ 9902893 (-)
elp1 ikbkap,LOC107751344,LOC106611638,LOC105419749 other downstream 165677 9801055 ~ 9824519 (-)
G72453 NA other downstream 764637 9188399 ~ 9225559 (-)
G72449 pcdh2g29,LOC108438834,LOC108438829,LOC108274931,LOC108438833 other downstream 815887 9165878 ~ 9174309 (-)
G72336 NA other downstream 1344595 8639538 ~ 8645601 (-)
LOC103037069 LOC103037069,LOC108442462,LOC101069290,LOC107675263,LOC107562830,LOC107707530,LOC107085412,LOC101171241,LOC103151621 other upstream 61445 10051952 ~ 10054034 (-)
LOC103046452 rassf7 other upstream 111266 10101773 ~ 10162484 (-)
LOC111193093 NA other upstream 1234272 11224779 ~ 11225954 (-)
LOC111193052 NA other upstream 1530380 11520887 ~ 11545246 (-)
LOC111193053 tnni2a.2,LOC108428758,LOC108275295,LOC103035007,LOC107549280,LOC107595232 other upstream 2058119 12048626 ~ 12051489 (-)

Expression


Co-expression Network