G72752


Basic Information

Item Value
gene id G72752
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 10797992 ~ 10798845 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU98124
gctccatccagcagctgtaccacctcctctgctgtgaccacctgctctgctccacccggcagctgtaccacctcctctgctgggaccacctgctctactccacccggcagctgtaccacctcctctgctgtgaccacctgctctgctccatccggcagctgtaccacctcctctgctgtgaccacctgctctgctccacccggcagct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98124 True 208 lncRNA 0.64 2 10797992 10798845

Neighbor

gene id symbol gene type direction distance location
tsg101 tsg101,tsg101a coding upstream 576165 10212563 ~ 10221827 (+)
LOC103047796 NA coding upstream 585496 10207709 ~ 10212496 (+)
hras hras,rash,LOC107562835,LOC103357265 coding upstream 591870 10185737 ~ 10206122 (+)
irf7 NA coding upstream 724891 10065416 ~ 10073101 (+)
thg1l thg1l,LOC103154062,LOC106912903,LOC107751338 coding upstream 820168 9974224 ~ 9977824 (+)
igsf22 igsf22 coding downstream 176876 10975721 ~ 11000591 (+)
spty2d1 spty2d1 coding downstream 230641 11029486 ~ 11034828 (+)
LOC103022764 uevld,LOC108275186 coding downstream 238655 11037500 ~ 11048398 (+)
th th,LOC108274586 coding downstream 306809 11105654 ~ 11116630 (+)
LOC103024122 LOC108439251,LOC100136550,LOC100304637,LOC107675272 coding downstream 324334 11123179 ~ 11132277 (+)
LOC111193092 NA non-coding upstream 698847 10097259 ~ 10099145 (+)
G72617 NA non-coding upstream 739106 10058685 ~ 10058886 (+)
G72615 NA non-coding upstream 740174 10057483 ~ 10057818 (+)
G72612 NA non-coding upstream 769146 10028483 ~ 10028846 (+)
G72606 NA non-coding upstream 819570 9977975 ~ 9978422 (+)
G72753 NA non-coding downstream 701 10799546 ~ 10801772 (+)
G72766 NA non-coding downstream 209704 11008549 ~ 11015607 (+)
G72871 NA non-coding downstream 385821 11184666 ~ 11184981 (+)
G72875 NA non-coding downstream 423929 11222774 ~ 11223004 (+)
G72876 NA non-coding downstream 425949 11224794 ~ 11226186 (+)
LOC103022150 brsk2a,brsk2b,LOC107707552,LOC107675281,LOC107600443 other upstream 171028 10272919 ~ 10626964 (+)
G72621 NA other upstream 715852 10078579 ~ 10082140 (+)
LOC103043718 LOC103043718,LOC108442465 other upstream 827950 9968506 ~ 9970042 (+)
G72281 LOC107754548,LOC108274935,LOC107754545,LOC107754498 other upstream 1648573 9142899 ~ 9149419 (+)
LOC103030246 pcdh2ab8,pcdh2ab10,pcdh2ab12,LOC108430950,LOC101884096,LOC108274577,LOC107588388,LOC108430926,LOC108430925,LOC108430922,LOC108275110,LOC108430948,LOC108275111,LOC107588302,LOC107660888,LOC107754492,LOC107655665 other upstream 1761966 8869128 ~ 9036026 (+)
LOC103043719 NA other downstream 2072639 12871484 ~ 12897931 (+)
G73533 NA other downstream 3849984 14648829 ~ 14649551 (+)
rpgrip1l rpgrip1l other downstream 4092689 14891534 ~ 14921003 (+)
svip svip other downstream 4773457 15572302 ~ 15577533 (+)
G74169 NA other downstream 5487831 16286676 ~ 16288329 (+)

Expression


Co-expression Network