G72847


Basic Information

Item Value
gene id G72847
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 11037508 ~ 11038145 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU98242
ccTTGTATTTGACTGGGATGTTGCCAACCAGGTTTAGCAGGTCCCTTTGAGTGCTGTCACTAAACGTGTAAGAACCAGTCTTCAGTTTCATGTCAGGATAAACACGGTTAAGTTTCTGAAGCTCCTCAATGGCAACATCTCgaaatttataCTTAGACAGGATCTTTTTGAGCGGCTCTGAGTTCAGCTCCATGTTTAACACTAACTCTTCAGCTCAGCCTCCTGACAGCTCCCTCAGCTTCCGCAAACGCTCACATCAACACTCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98242 True 268 lncRNA 0.46 3 11037508 11038145

Neighbor

gene id symbol gene type direction distance location
tmem86a tmem86a,LOC107707555,LOC107709947,LOC107688565 coding downstream 8858 11008621 ~ 11028650 (-)
b4galnt4 b4galnt4,LOC108439245 coding downstream 72326 10725524 ~ 10965182 (-)
abtb2 abtb2,abtb2b,LOC107675288,LOC107688574 coding downstream 319524 10630846 ~ 10717984 (-)
LOC103047177 ldha,LOC103047177,LOC108442466,LOC107558315,LOC107707550 coding downstream 804311 10223118 ~ 10233197 (-)
lrrc56 NA coding downstream 852662 10166327 ~ 10184846 (-)
LOC103038359 NA coding upstream 11552 11049697 ~ 11084679 (-)
kcnj11 kcnj11,LOC107758740 coding upstream 699138 11737283 ~ 11739371 (-)
abcc8 abcc8 coding upstream 701817 11739962 ~ 11804035 (-)
LOC111193095 NA coding upstream 729364 11767509 ~ 11776139 (-)
ush1c ush1c,LOC107675293,LOC106561052 coding upstream 767672 11805817 ~ 11834740 (-)
G72845 spty2d1,LOC107688563 non-coding downstream 2731 11033157 ~ 11034777 (-)
G72807 NA non-coding downstream 407684 10629582 ~ 10629824 (-)
G72806 NA non-coding downstream 408022 10629197 ~ 10629486 (-)
G72803 NA non-coding downstream 410483 10571164 ~ 10627025 (-)
G72802 NA non-coding downstream 412237 10567904 ~ 10625271 (-)
G72857 NA non-coding upstream 40943 11079088 ~ 11132273 (-)
G72881 NA non-coding upstream 193034 11231179 ~ 11231678 (-)
G72967 mob2,LOC108411394,LOC108274974 non-coding upstream 656533 11694678 ~ 11733149 (-)
G72974 NA non-coding upstream 695999 11734144 ~ 11734846 (-)
G73030 NA non-coding upstream 1087391 12125536 ~ 12126823 (-)
LOC103046452 rassf7 other downstream 875024 10101773 ~ 10162484 (-)
LOC103037069 LOC103037069,LOC108442462,LOC101069290,LOC107675263,LOC107562830,LOC107707530,LOC107085412,LOC101171241,LOC103151621 other downstream 983474 10051952 ~ 10054034 (-)
LOC103042271 LOC108442478,LOC108275244 other downstream 1134615 9856399 ~ 9902893 (-)
elp1 ikbkap,LOC107751344,LOC106611638,LOC105419749 other downstream 1212989 9801055 ~ 9824519 (-)
G72453 NA other downstream 1811949 9188399 ~ 9225559 (-)
LOC111193093 NA other upstream 186634 11224779 ~ 11225954 (-)
LOC111193052 NA other upstream 482742 11520887 ~ 11545246 (-)
LOC111193053 tnni2a.2,LOC108428758,LOC108275295,LOC103035007,LOC107549280,LOC107595232 other upstream 1010481 12048626 ~ 12051489 (-)
fbxo31 fbxo31,LOC107675295,LOC107751272,LOC107742043,LOC107662464 other upstream 1510545 12548690 ~ 12564978 (-)
G73172 NA other upstream 1572689 12610834 ~ 12621356 (-)

Expression


Co-expression Network