G72857


Basic Information

Item Value
gene id G72857
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 11079088 ~ 11132273 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU98254
TTCgataaaatgttttctttattgatattaaaaatgaaagtaCATGAATTGTGCATTTCGGACATTCTAGCGTGCAGAggttaaatcaataaaaatacacacaggCTGAGTGGGCTACTGACACTAATATGTTGCATTGACAGGCAAAGGATCCCTTCATATTTCAGCGCaaagaacgttttttttttctttacaccaTTCACACAGAAAGTAGCctgttcaaaataaaaaaagagtggaTGCAGTCCTAGCAGGAAGTAGAAAAAGATTGTTATGTCTCCAGaagatgtaataataataataataataataataataataattgcactGCTTTATCACACAACTGATATGGATAACCAGACAGATTACTGATGAAGACTGTAAATGCAGAGTGGTATACTGTAGACTGTAGTCATTCTGTAGTGGCTTCATGATCTTAAGTGATGTAATATGGTCTGTTAAAGTAGTACTGGCTCATTCTCCATTTTTCTCCATGTCTAAGCGTGGGAAATATCCGAGGAGTTGAGGAGTGAGTGGGGGAATAAAACACAGGATTGCTCCTAATGGCTCTCTGTTCCTCTGCTCTCTGTCTCGAGTGAGGATGAGATCCTCATAAACCGTTTCTTCCTGAGTATAACACTGCGTCGAAGATGGTTCAGTTAGGTAGCCCTTTAGCAATGAAGTAAGATTGGTATTCCTTGATGAGTGAAGGAGGAACCTGTTTCCAGCCAAGGCAGGATGTAGGGCGatgaagaaagacagagagtcAGAGGGAGGCAGACAATGACGTATCCATTATTATAATAAAGCACCCCCTCTGAGTGACCTCAGCAGCGATGAGGAAGCATCACCTCACTGCCCTTCAGTGCTCACTTACAGGCTGAACACTTCCCCTGTCAATCGCTGCTGAGCCATGGAGGATAACCGTGTTACTAGACGCTGCCCTTTACACTGATCTGTGACTCCACTACAAAGCTGTCCCGTGGTGCAAAGAGACCGTTTCCCCCATTACGCCTCATTACAGCTACTGGCTTACGACTCgggttacttttactttaacacCACTCAAATCCAATACATGTGACAAACGCTTAACTCCTATACAACTCCTACGCTGATTTACTCATATATACATACTGCAAAAAACACCCCCCTCCCCACtttaaaaaaaaaaaaaaaaaaaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98254 True 1190 lncRNA 0.41 2 11079088 11132273

Neighbor

gene id symbol gene type direction distance location
tmem86a tmem86a,LOC107707555,LOC107709947,LOC107688565 coding downstream 50438 11008621 ~ 11028650 (-)
b4galnt4 b4galnt4,LOC108439245 coding downstream 113906 10725524 ~ 10965182 (-)
abtb2 abtb2,abtb2b,LOC107675288,LOC107688574 coding downstream 361104 10630846 ~ 10717984 (-)
LOC103047177 ldha,LOC103047177,LOC108442466,LOC107558315,LOC107707550 coding downstream 845891 10223118 ~ 10233197 (-)
lrrc56 NA coding downstream 894242 10166327 ~ 10184846 (-)
kcnj11 kcnj11,LOC107758740 coding upstream 605010 11737283 ~ 11739371 (-)
abcc8 abcc8 coding upstream 607689 11739962 ~ 11804035 (-)
LOC111193095 NA coding upstream 635236 11767509 ~ 11776139 (-)
ush1c ush1c,LOC107675293,LOC106561052 coding upstream 673544 11805817 ~ 11834740 (-)
LOC103031503 tnnt3b,LOC108428830,LOC108275000 coding upstream 812152 11944425 ~ 11953789 (-)
G72847 NA non-coding downstream 40943 11037508 ~ 11038145 (-)
G72845 spty2d1,LOC107688563 non-coding downstream 44311 11033157 ~ 11034777 (-)
G72807 NA non-coding downstream 449264 10629582 ~ 10629824 (-)
G72806 NA non-coding downstream 449602 10629197 ~ 10629486 (-)
G72803 NA non-coding downstream 452063 10571164 ~ 10627025 (-)
G72881 NA non-coding upstream 98906 11231179 ~ 11231678 (-)
G72967 mob2,LOC108411394,LOC108274974 non-coding upstream 562405 11694678 ~ 11733149 (-)
G72974 NA non-coding upstream 601871 11734144 ~ 11734846 (-)
G73030 NA non-coding upstream 993263 12125536 ~ 12126823 (-)
G73098 NA non-coding upstream 1062300 12194573 ~ 12196578 (-)
LOC103046452 rassf7 other downstream 916604 10101773 ~ 10162484 (-)
LOC103037069 LOC103037069,LOC108442462,LOC101069290,LOC107675263,LOC107562830,LOC107707530,LOC107085412,LOC101171241,LOC103151621 other downstream 1025054 10051952 ~ 10054034 (-)
LOC103042271 LOC108442478,LOC108275244 other downstream 1176195 9856399 ~ 9902893 (-)
elp1 ikbkap,LOC107751344,LOC106611638,LOC105419749 other downstream 1254569 9801055 ~ 9824519 (-)
G72453 NA other downstream 1853529 9188399 ~ 9225559 (-)
LOC111193093 NA other upstream 92506 11224779 ~ 11225954 (-)
LOC111193052 NA other upstream 388614 11520887 ~ 11545246 (-)
LOC111193053 tnni2a.2,LOC108428758,LOC108275295,LOC103035007,LOC107549280,LOC107595232 other upstream 916353 12048626 ~ 12051489 (-)
fbxo31 fbxo31,LOC107675295,LOC107751272,LOC107742043,LOC107662464 other upstream 1416417 12548690 ~ 12564978 (-)
G73172 NA other upstream 1478561 12610834 ~ 12621356 (-)

Expression


Co-expression Network