G72881



Basic Information


Item Value
gene id G72881
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 11231179 ~ 11231678 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>TU98284
TGGCCAGTAGAAGcaagctggttgaacagcatggccagtagGAACAAGCTGGTTGAAGAGCATGGCCAGTAGAAACAAGCTGGTAGAACAGCATGGCCAGTAGAAGcaagctggttgaacagcatggCCAGTAAGAACAAGCTGGTTAAATTGCATGGGCAGTAGGAacaagctggttgaacagcatggGCAGTAAGAacaagctggttgaacagcatggCCAATAAGACCAAGCTAGATAAACAGCATGGCCAATAAGACCAAGCTAGTTGAACAGCATGGCCAGTAAGAacaagctggttgaacagcatggccagtaggaacaagctggttgaacagcatggc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU98284 True 345 lncRNA 0.49 2 11231179 11231678

Neighbor


gene id symbol gene type direction distance location
LOC103038359 NA coding downstream 146500 11049697 ~ 11084679 (-)
tmem86a tmem86a,LOC107707555,LOC107709947,LOC107688565 coding downstream 202529 11008621 ~ 11028650 (-)
b4galnt4 b4galnt4,LOC108439245 coding downstream 265997 10725524 ~ 10965182 (-)
abtb2 abtb2,abtb2b,LOC107675288,LOC107688574 coding downstream 513195 10630846 ~ 10717984 (-)
LOC103047177 ldha,LOC103047177,LOC108442466,LOC107558315,LOC107707550 coding downstream 997982 10223118 ~ 10233197 (-)
kcnj11 kcnj11,LOC107758740 coding upstream 505605 11737283 ~ 11739371 (-)
abcc8 abcc8 coding upstream 508284 11739962 ~ 11804035 (-)
LOC111193095 NA coding upstream 535831 11767509 ~ 11776139 (-)
ush1c ush1c,LOC107675293,LOC106561052 coding upstream 574139 11805817 ~ 11834740 (-)
LOC103031503 tnnt3b,LOC108428830,LOC108275000 coding upstream 712747 11944425 ~ 11953789 (-)
G72857 NA non-coding downstream 98906 11079088 ~ 11132273 (-)
G72847 NA non-coding downstream 193034 11037508 ~ 11038145 (-)
G72845 spty2d1,LOC107688563 non-coding downstream 196402 11033157 ~ 11034777 (-)
G72807 NA non-coding downstream 601355 10629582 ~ 10629824 (-)
G72806 NA non-coding downstream 601693 10629197 ~ 10629486 (-)
G72967 mob2,LOC108411394,LOC108274974 non-coding upstream 463000 11694678 ~ 11733149 (-)
G72974 NA non-coding upstream 502466 11734144 ~ 11734846 (-)
G73030 NA non-coding upstream 893858 12125536 ~ 12126823 (-)
G73098 NA non-coding upstream 962895 12194573 ~ 12196578 (-)
G73119 LOC108428815,LOC108428741 non-coding upstream 1271185 12502863 ~ 12539230 (-)
LOC111193093 NA other downstream 5225 11224779 ~ 11225954 (-)
LOC103046452 rassf7 other downstream 1068695 10101773 ~ 10162484 (-)
LOC103037069 LOC103037069,LOC108442462,LOC101069290,LOC107675263,LOC107562830,LOC107707530,LOC107085412,LOC101171241,LOC103151621 other downstream 1177145 10051952 ~ 10054034 (-)
LOC103042271 LOC108442478,LOC108275244 other downstream 1328286 9856399 ~ 9902893 (-)
elp1 ikbkap,LOC107751344,LOC106611638,LOC105419749 other downstream 1406660 9801055 ~ 9824519 (-)
LOC111193052 NA other upstream 289209 11520887 ~ 11545246 (-)
LOC111193053 tnni2a.2,LOC108428758,LOC108275295,LOC103035007,LOC107549280,LOC107595232 other upstream 816948 12048626 ~ 12051489 (-)
fbxo31 fbxo31,LOC107675295,LOC107751272,LOC107742043,LOC107662464 other upstream 1317012 12548690 ~ 12564978 (-)
G73172 NA other upstream 1379156 12610834 ~ 12621356 (-)
LOC103025073 dynlrb2,LOC103025073,LOC106573385 other upstream 3310518 14542196 ~ 14545536 (-)

Expression



Co-expression Network