G73001


Basic Information

Item Value
gene id G73001
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 11978208 ~ 11978882 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU98456
TGTTGTTCCACTCACCTCACAGTCTTTTTGGTTTTAAACAGCTGTGAAGTCACTTCCTCTCCAGCAGTGTCCTCATTGTTGGCACTGGGCATCCTGTCGTGCTGCAGGAAGACTTTGGATGTGTATGAGACCTTTACTTCCTGTCTCTTCACCTTCTCCTCAGCGTGTGGTCTTGGATCTTCCTCTTGTCTCTTGTTTATTCTCGTCACCTCTTCCTTCCATTCTTCTGCCTCTTTGTCCTTGAagctgctctgtctctctccaaaCTGCATCCGCTTCACACTGCTCTTCTTCACGGGCTGgtactcctcctcttcctccactTGGTATTGGGCCTTAAGTGGTCGAGTCAGTACGCTGGAGCTGATCTTGTCTTCTCTTTTTGTTGCTCCGTTCATGGTTCTTTCCACCTCCAGGTCCTCCTCTCTGGGGCCGTTCTCCTCCTGCCTGGCTCGTCTGTCTCGCTCTAGTCTCTGGGTCCAGTCACTGAAGCCTTCGTCTTCCTCCAGACCTCCAGGGCTGCTGGGCTTCAGACCGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98456 True 539 lncRNA 0.52 2 11978208 11978882

Neighbor

gene id symbol gene type direction distance location
LOC103034044 NA coding upstream 14424 11955624 ~ 11963784 (+)
myod1 myod1,myod coding upstream 36391 11939524 ~ 11941817 (+)
LOC103038976 LOC108428833 coding upstream 39828 11925987 ~ 11938380 (+)
LOC103029705 mob2,LOC108411394,LOC108274974 coding upstream 245013 11665815 ~ 11733195 (+)
LOC103028645 LOC108428835 coding upstream 343615 11563332 ~ 11634593 (+)
znf469 NA coding downstream 386483 12365365 ~ 12417357 (+)
LOC103039191 LOC108428816 coding downstream 479663 12458545 ~ 12485409 (+)
LOC103039298 NA coding downstream 511702 12490584 ~ 12547678 (+)
fanci fanci,LOC107673243,LOC107670230,LOC107564606 coding downstream 589955 12568837 ~ 12587543 (+)
trnar-ucg_4 NA coding downstream 624470 12603352 ~ 12603424 (+)
G72993 NA non-coding upstream 26443 11943977 ~ 11951765 (+)
G72946 NA non-coding upstream 159970 11812999 ~ 11818238 (+)
G72905 NA non-coding upstream 298386 11610470 ~ 11679822 (+)
G72893 NA non-coding upstream 352712 11567577 ~ 11625496 (+)
G72882 NA non-coding upstream 455547 11521012 ~ 11522661 (+)
G72992 NA non-coding downstream 54201 12033083 ~ 12050540 (+)
G73029 NA non-coding downstream 146751 12125633 ~ 12126858 (+)
G73031 NA non-coding downstream 151680 12130562 ~ 12130798 (+)
G73045 NA non-coding downstream 215690 12194572 ~ 12196710 (+)
G73081 NA non-coding downstream 466811 12445693 ~ 12448514 (+)
LOC103022150 brsk2a,brsk2b,LOC107707552,LOC107675281,LOC107600443 other upstream 1351244 10272919 ~ 10626964 (+)
G72621 NA other upstream 1896068 10078579 ~ 10082140 (+)
LOC103043718 LOC103043718,LOC108442465 other upstream 2008166 9968506 ~ 9970042 (+)
G72281 LOC107754548,LOC108274935,LOC107754545,LOC107754498 other upstream 2828789 9142899 ~ 9149419 (+)
LOC103030246 pcdh2ab8,pcdh2ab10,pcdh2ab12,LOC108430950,LOC101884096,LOC108274577,LOC107588388,LOC108430926,LOC108430925,LOC108430922,LOC108275110,LOC108430948,LOC108275111,LOC107588302,LOC107660888,LOC107754492,LOC107655665 other upstream 2942182 8869128 ~ 9036026 (+)
LOC103043719 NA other downstream 892602 12871484 ~ 12897931 (+)
G73533 NA other downstream 2669947 14648829 ~ 14649551 (+)
rpgrip1l rpgrip1l other downstream 2912652 14891534 ~ 14921003 (+)
svip svip other downstream 3593420 15572302 ~ 15577533 (+)
G74169 NA other downstream 4307794 16286676 ~ 16288329 (+)

Expression


Co-expression Network