G73091


Basic Information

Item Value
gene id G73091
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 12557634 ~ 12557852 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU98580
TCCATCTGCTTCTGCCAAAATATCATGCTAATGAGCTGAGTGGCAACGAGGACATTGGTATGTGGCACATCAACCaagtgtgtttgagtaaaatgataattgatgttttatactataaactacagaaaacatttctcccaaattccaaataaaaataatgtcatttagagcacttttttgcagaaaatgagaaatggctgaaataacaaaaaagatgca

Function

GO:

id name namespace
GO:0006030 chitin metabolic process biological_process
GO:0006032 chitin catabolic process biological_process
GO:0006040 amino sugar metabolic process biological_process
GO:0042737 drug catabolic process biological_process
GO:0046348 amino sugar catabolic process biological_process
GO:1901071 glucosamine-containing compound metabolic process biological_process
GO:1901072 glucosamine-containing compound catabolic process biological_process
GO:1901136 carbohydrate derivative catabolic process biological_process
GO:0006022 aminoglycan metabolic process biological_process
GO:0006026 aminoglycan catabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98580 True 219 lncRNA 0.33 1 12557634 12557852

Neighbor

gene id symbol gene type direction distance location
LOC103039298 NA coding upstream 9956 12490584 ~ 12547678 (+)
LOC103039191 LOC108428816 coding upstream 72225 12458545 ~ 12485409 (+)
znf469 NA coding upstream 140277 12365365 ~ 12417357 (+)
LOC103034044 NA coding upstream 593850 11955624 ~ 11963784 (+)
myod1 myod1,myod coding upstream 615817 11939524 ~ 11941817 (+)
fanci fanci,LOC107673243,LOC107670230,LOC107564606 coding downstream 10985 12568837 ~ 12587543 (+)
trnar-ucg_4 NA coding downstream 45500 12603352 ~ 12603424 (+)
man2a2 man2a2,LOC107750719,LOC107720774,LOC107670215 coding downstream 122254 12680106 ~ 12715658 (+)
LOC103044030 LOC103044030,LOC108428802,LOC108428756 coding downstream 339933 12897785 ~ 12909061 (+)
rag1 rag1,LOC107750737,LOC107670202 coding downstream 376600 12934452 ~ 12942962 (+)
G73082 rask,kras,LOC108274959,LOC105900436 non-coding upstream 101630 12450486 ~ 12456004 (+)
G73081 NA non-coding upstream 109120 12445693 ~ 12448514 (+)
G73045 NA non-coding upstream 360924 12194572 ~ 12196710 (+)
G73031 NA non-coding upstream 426836 12130562 ~ 12130798 (+)
G73029 NA non-coding upstream 430776 12125633 ~ 12126858 (+)
G73146 fbxo31 non-coding downstream 6281 12564133 ~ 12564792 (+)
G73177 NA non-coding downstream 81393 12639245 ~ 12641822 (+)
G73189 unc45a non-coding downstream 106115 12663967 ~ 12669729 (+)
G73191 NA non-coding downstream 117134 12674986 ~ 12676348 (+)
G73214 NA non-coding downstream 389794 12947646 ~ 12952320 (+)
LOC103022150 brsk2a,brsk2b,LOC107707552,LOC107675281,LOC107600443 other upstream 1930670 10272919 ~ 10626964 (+)
G72621 NA other upstream 2475494 10078579 ~ 10082140 (+)
LOC103043718 LOC103043718,LOC108442465 other upstream 2587592 9968506 ~ 9970042 (+)
G72281 LOC107754548,LOC108274935,LOC107754545,LOC107754498 other upstream 3408215 9142899 ~ 9149419 (+)
LOC103030246 pcdh2ab8,pcdh2ab10,pcdh2ab12,LOC108430950,LOC101884096,LOC108274577,LOC107588388,LOC108430926,LOC108430925,LOC108430922,LOC108275110,LOC108430948,LOC108275111,LOC107588302,LOC107660888,LOC107754492,LOC107655665 other upstream 3521608 8869128 ~ 9036026 (+)
LOC103043719 NA other downstream 313632 12871484 ~ 12897931 (+)
G73533 NA other downstream 2090977 14648829 ~ 14649551 (+)
rpgrip1l rpgrip1l other downstream 2333682 14891534 ~ 14921003 (+)
svip svip other downstream 3014450 15572302 ~ 15577533 (+)
G74169 NA other downstream 3728824 16286676 ~ 16288329 (+)

Expression


Co-expression Network