G73146 (fbxo31)


Basic Information

Item Value
gene id G73146
gene name fbxo31
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 12564133 ~ 12564792 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU98662
CTCAGTGCATCGTCTCCTCCAGATGGTTTCCGTGCTGAGGATCTGCCTGAATTTCTTGCAGACCAAGGCCAGGTTGGGCAGCACCGTGCCCGGCAAAGAGGAGAAGATCTCCACTAGAAGCTCCGGGGGAAGATCCACCAGAGACTGAGGGCTCCCCGCTACTCTAGCGGCGGCAGCGGCCTCGCTAGGCCCCGCTGTGCGGCTCTGGTGCCAGCCGCCCCTCGCCTCGCCCACGATCCTCTCCCCCTCCTCTTCGTCCATGTCCATTTCGGAGTCGCTGCCGTGCTGGTCGTGCCTCTGCCGCCGCCTGCACCGCCGCGACTGACCCACTCCGCAGAGTCTGGCACACACCGCCATCCGTAGTCACCAAACAGGCAACATTACATCAGTGGAACAGCTGCCGTGTCCGTCCCTCCGCTCTCGCTttcgctctcgctctcgctctct
>TU98665
cagtgcctttaGGAAGCATGTATCGATTGGTAGCAAAACTAGACAGAACACCGAACCCCGGAATGGACTCGAATAAGTACACTGTCATATAAGGCAGTCCTGCCAAacatagctaacgctagctagctaatagCTTAACCCCCACACACAGCTGATTTTAGCTGGCTGGTGGGTCTCCGTCAAACACAGGGACGAGCTCCAGTGTTGTTTACCCTCAGTGCATCGTCTCCTCCAGATGGTTTCCGTGCTGAGGATCTGCCTGAATTTCTTGCAGACCAAGGCCAGGTTGGGCAGCACCGTGCCCGGCAAAGAGGAGAAGATCTCCACTAGAAGCTCCGGGGGAAGATCCACCAGAGACTGAGGGCTCCCCGCTACTCTAGCGGCGGCAGCGGCCTCGCTAGGCCCCGCTGTGCGGCTCTGGTGCCAGCCGCCCCTCGCCTCGCCCACGATCCTCTCCCCCTCCTCTTCGTCCATGTCCATTTCGGAGTCGCTGCCGTGCTGGTCGTGCCTCTGCCGCCGCCTGCACCGCCGCGACTGACCCACTCCGCAGAGTCTGGCACACACCGCCATCCGTAGTCACCAAACAGGCAACATTACATCAGTGGAACAGCTGCCGTGTCCGTCCCTCCGCTCTCGCTttcgctctcgctctcgctctct

Function

symbol description
fbxo31 Predicted to enable cyclin binding activity. Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to act upstream of or within mitotic G1 DNA damage checkpoint signaling. Predicted to be part of SCF ubiquitin ligase complex. Human ortholog(s) of this gene implicated in autosomal recessive non-syndromic intellectual disability. Orthologous to human FBXO31 (F-box protein 31).

NR:

description
PREDICTED: F-box only protein 31 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98662 False 447 lncRNA 0.64 1 12564346 12564792
TU98665 True 660 lncRNA 0.59 1 12564133 12564792

Neighbor

gene id symbol gene type direction distance location
LOC103039298 NA coding upstream 16455 12490584 ~ 12547678 (+)
LOC103039191 LOC108428816 coding upstream 78724 12458545 ~ 12485409 (+)
znf469 NA coding upstream 146776 12365365 ~ 12417357 (+)
LOC103034044 NA coding upstream 600349 11955624 ~ 11963784 (+)
myod1 myod1,myod coding upstream 622316 11939524 ~ 11941817 (+)
fanci fanci,LOC107673243,LOC107670230,LOC107564606 coding downstream 4045 12568837 ~ 12587543 (+)
trnar-ucg_4 NA coding downstream 38560 12603352 ~ 12603424 (+)
man2a2 man2a2,LOC107750719,LOC107720774,LOC107670215 coding downstream 115314 12680106 ~ 12715658 (+)
LOC103044030 LOC103044030,LOC108428802,LOC108428756 coding downstream 332993 12897785 ~ 12909061 (+)
rag1 rag1,LOC107750737,LOC107670202 coding downstream 369660 12934452 ~ 12942962 (+)
G73091 NA non-coding upstream 6281 12557634 ~ 12557852 (+)
G73082 rask,kras,LOC108274959,LOC105900436 non-coding upstream 108129 12450486 ~ 12456004 (+)
G73081 NA non-coding upstream 115619 12445693 ~ 12448514 (+)
G73045 NA non-coding upstream 367423 12194572 ~ 12196710 (+)
G73031 NA non-coding upstream 433335 12130562 ~ 12130798 (+)
G73177 NA non-coding downstream 74453 12639245 ~ 12641822 (+)
G73189 unc45a non-coding downstream 99175 12663967 ~ 12669729 (+)
G73191 NA non-coding downstream 110194 12674986 ~ 12676348 (+)
G73214 NA non-coding downstream 382854 12947646 ~ 12952320 (+)
G73288 NA non-coding downstream 532949 13097741 ~ 13098590 (+)
LOC103022150 brsk2a,brsk2b,LOC107707552,LOC107675281,LOC107600443 other upstream 1937169 10272919 ~ 10626964 (+)
G72621 NA other upstream 2481993 10078579 ~ 10082140 (+)
LOC103043718 LOC103043718,LOC108442465 other upstream 2594091 9968506 ~ 9970042 (+)
G72281 LOC107754548,LOC108274935,LOC107754545,LOC107754498 other upstream 3414714 9142899 ~ 9149419 (+)
LOC103030246 pcdh2ab8,pcdh2ab10,pcdh2ab12,LOC108430950,LOC101884096,LOC108274577,LOC107588388,LOC108430926,LOC108430925,LOC108430922,LOC108275110,LOC108430948,LOC108275111,LOC107588302,LOC107660888,LOC107754492,LOC107655665 other upstream 3528107 8869128 ~ 9036026 (+)
LOC103043719 NA other downstream 306692 12871484 ~ 12897931 (+)
G73533 NA other downstream 2084037 14648829 ~ 14649551 (+)
rpgrip1l rpgrip1l other downstream 2326742 14891534 ~ 14921003 (+)
svip svip other downstream 3007510 15572302 ~ 15577533 (+)
G74169 NA other downstream 3721884 16286676 ~ 16288329 (+)

Expression


Co-expression Network