fbxo31 (fbxo31,LOC107675295,LOC107751272,LOC107742043,LOC107662464)


Basic Information

Item Value
gene id fbxo31
gene name fbxo31,LOC107675295,LOC107751272,LOC107742043,LOC107662464
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 12548690 ~ 12564978 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU98666
agggtgagagagcgagagcgagagcgaaAGCGAGAGCGGAGGGACGGACACGGCAGCTGTTCCACTGATGTAATGTTGCCTGTTTGGTGACTACGGATGGCGGTGTGTGCCAGACTCTGCGGAGTGGGTCAGTCGCGGCGGTGCAGGCGGCGGCAGAGGCACGACCAGCACGGCAGCGACTCCGAAATGGACATGGACGAAGAGGAGGGGGAGAGGATCGTGGGCGAGGCGAGGGGCGGCTGGCACCAGAGCCGCACAGCGGGGCCTAGCGAGGCCGCTGCCGCCGCTAGAGTAGCGGGGAGCCCTCAGTCTCTGGTGGATCTTCCCCCGGAGCTTCTAGTGGAGATCTTCTCCTCTTTGCCGGGCACGGTGCTGCCCAACCTGGCCTTGGTCTGCAAGAAATTCAGGCAGATCCTCAGCACGGAAACCATCTGGAGGAGACGATGCACTG
>TU98667
TCCAGCAGTCAGTGCTGCCCGTCTGCGTCACGGGAAACCGCCCAGTCACGTAGCAGATGAGCTCGGCGACTGGCTGGCTGACTGACTGCTGTGAGTGTATGGTAGATGTTGTGAGCGGGGAAGAACGGACGGACCGGTggggagcggagcggagcggagcggagcgggagggtgagagagcgagagcgagagcgaaAGCGAGAGCGGAGGGACGGACACGGCAGCTGTTCCACTGATGTAATGTTGCCTGTTTGGTGACTACGGATGGCGGTGTGTGCCAGACTCTGCGGAGTGGGTCAGTCGCGGCGGTGCAGGCGGCGGCAGAGGCACGACCAGCACGGCAGCGACTCCGAAATGGACATGGACGAAGAGGAGGGGGAGAGGATCGTGGGCGAGGCGAGGGGCGGCTGGCACCAGAGCCGCACAGCGGGGCCTAGCGAGGCCGCTGCCGCCGCTAGAGTAGCGGGGAGCCCTCAGTCTCTGGTGGATCTTCCCCCGGAGCTTCTAGTGGAGATCTTCTCCTCTTTGCCGGGCACGGTGCTGCCCAACCTGGCCTTGGTCTGCAAGAAATTCAGGCAGATCCTCAGCACGGAAACCATCTGGAGGAGACGATGCACTG
>TU98668
GAGTGTATGGTAGATGTTGTGAGCGGGGAAGAACGGACGGACCGGTggggagcggagcggagcggagcggagcgggagggtgagagagcgagagcgagagcgaaAGCGAGAGCGGAGGGACGGACACGGCAGCTGTTCCACTGATGTAATGTTGCCTGTTTGGTGACTACGGATGGCGGTGTGTGCCAGACTCTGCGGAGTGGGTCAGTCGCGGCGGTGCAGGCGGCGGCAGAGGCACGACCAGCACGGCAGCGACTCCGAAATGGACATGGACGAAGAGGAGGGGGAGAGGATCGTGGGCGAGGCGAGGGGCGGCTGGCACCAGAGCCGCACAGCGGGGCCTAGCGAGGCCGCTGCCGCCGCTAGAGTAGCGGGGAGCCCTCAGTCTCTGGTGGATCTTCCCCCGGAGCTTCTAGTGGAGATCTTCTCCTCTTTGCCGGGCACGGTGCTGCCCAACCTGGCCTTGGTCTGCAAGAAATTCAGGCAGATCCTCAGCACGGAAACCATCTGGAGGAGACGATGCACTG
>XM_022671915.1
TAATGAGGCATATCCAGCAGTCAGTGCTGCCCGTCTGCGTCACGGGAAACCGCCCAGTCACGTAGCAGATGAGCTCGGCGACTGGCTGGCTGACTGACTGCTGTGAGTGTATGGTAGATGTTGTGAGCGGGGAAGAACGGACGGACCGGTggggagcggagcggagcggagcggagcgggagggtgagagagcgagagcgagagcgaaAGCGAGAGCGGAGGGACGGACACGGCAGCTGTTCCACTGATGTAATGTTGCCTGTTTGGTGACTACGGATGGCGGTGTGTGCCAGACTCTGCGGAGTGGGTCAGTCGCGGCGGTGCAGGCGGCGGCAGAGGCACGACCAGCACGGCAGCGACTCCGAAATGGACATGGACGAAGAGGAGGGGGAGAGGATCGTGGGCGAGGCGAGGGGCGGCTGGCACCAGAGCCGCACAGCGGGGCCTAGCGAGGCCGCTGCCGCCGCTAGAGTAGCGGGGAGCCCTCAGTCTCTGGTGGATCTTCCCCCGGAGCTTCTAGTGGAGATCTTCTCCTCTTTGCCGGGCACGGTGCTGCCCAACCTGGCCTTGGTCTGCAAGAAATTCAGGCAGATCCTCAGCACGGAAACCATCTGGAGGAGACGATGCACTGAGGGTAAACAACACTGGAGCTCGTCCCTGTGTTTGACGGAGACCCACCAGCCAGCTAAAATCAGCTGTGTGTGGGGGTTAAccccccacacacgtGCAGCAGCGCAAACGAGTTCTCAGCCAGCTGTTCATATATTTTACCTTTTCCTCTCCTCCTGTGGTGCATTCACCTGTACCTGTCCAGGTGTGAACCCTCGTGTGAAGTCTGGTCGCTTTATGAAGCTCCTTCCCGATTACGAGCACATGGACTATCGGGACGTGTATGCACACTTGCTCCATCCATACAGACACATTTTGGGTCTCTGGCAGCCAGACATAGGCCCATACGGAGGTCTACTGAATGTAGTGGTGGATGGCCTGTTTATAATCGGTTGGATGTATCTGCCGCCTCACGATCCTCGTGTAGAGGACCCAATGCGCCGCCGCCCCCTCTTCCGCATTCACATGTGGGAGAGTAAGAAGGCAACTGTGGAGTGCATGTATGGCCATAAGGGTCCTCACAAAGGAGACATTCAGACAGTAAAAAAAGACGAGTTCTCTACCAAATGCAACCAAACAGATCACCATCGAATGCCAGGGGGCAGACAAGAGGAGTTTCGTACGTGGCTGGAGGAGGAATGGGGACGGACACTGGAGGATATTTTTCATGAACACATGCAGGAACTGATCCTGATGAAGTTTATCTACACCAGCCAATATGATAATTGCCTGACGTACCGGAGAATATACCTGCCCCCGTGCCTACCTTCAGACTTACTGCAGCCGGGCCTCTTCAAAGGCACATACGGCAGCCACGGCCTGGAGATCATCATGCTGAGCTTCCATGGCTCTCGGGCCAAAGCCACCAAACTCACAGGTGACCCTAATGTGCCAGCAGGTCAGCTGACCTTAGACATAGACCTTAGTCGACCGGTTCAGCTGCCTGACTTGGAGCACCAGCGGAGCATCGAGGAGCTCTCTCGCCTGGTGATGGGAGTGCATGAGGAAGTCCAGAGGGGATCCCAGGATCCTGCTGCTGCATCAGCGGAGGCAGAAGAGTGTTCCACTGGGGCAGAGGGCTCAGAGAACACCCCTGCGGATGAAGCAGAAGAAGCTGGCGCTGGAGCAACAAGTTCTCGCACTGAACCCCAGCCCTTCGTTCTGCCTTTAGGAGTCATGGCCCGCAATGAGGTGTACCCACGCACATGCAAGATGTGTTTCTATGGGACAGGCCTCATAGCTGGTCACGGCTTCACGAGTCCGGAGCGCACACCAGGCCTTTTTGTTCTGTTCGATGACGACCGCTTTGGTTTCATCTGGCTGGAGCTCAAGTCCTTCAGCCTGTACAGCCGGCTGACAGACCAGCTGGAGCACGCTCAGGCCCCCAACATGGAGCGCTTCGAGGCTATGCTCCGCAACATGCAATCATGGACATCCTGATAGCCCAGCACCTCCTCCTCCGTCCTGCTCCCCTGCAAAAGAGACGGCAATTCCAGCCCTGCAGGGCCACACGTCCAACTCGCCTGACTGAACTCATGAGTAATTCCCAATCTGCTGATGAGTTGAGCCATAAGTGTTGGAGCAGGGACAGAAAATGACATGTTGTTGTGGTCTCCCAGGGCAGGAAATGCCCATTCCTGTTCAACATGCTCCAAAACTCACATCCCCACACAACCTGAAGCAACCTCCCTATAGTCTTCACACATACAAAAAGAAATACCCTGCACACAAGTGTGTCTGCAGAGGCAAGCTCATACAGGTTGTATTATACTGAGGCTTTCTTATCagctttttaattaatttatttttgtaacctggagatgaagatgaagaggatTATATGACAATACACCCACATACTCTGGAACAAGCTGAGTGTGCCTCTGTATCATTACCATGGTATTTAACCCAAGACTACTCGTAGAAATTTGTAGCTGCCTGTACTCTTGAAAGTAATTTAAGTTCTAAAGGTCTGTCTTCAACAAAAGTGGGATGTTCCCAGCTGTTCAGTTGGTGGTAGCTTATAATTGATGCTTTGTCCTTTGTCCGATCTCATGCTATTTGActatgctgttgttttttaatctgtaCTGCTGTTGCATTGCTTTTAATTTCCGTGGCTTGCGTTGACCATGAGGATGATTGAAGAGGTTGcctctcatttttttatttgaatgttttcAATAAGTAACTGACGTAGCCTGTGGTACACAGTACAGATGGTTAGAATGTGAACCTTGTATGACCCATGATAAAAGCTGCATTCCATTTGAACTTGGATGTCGGAAAATGTTTTAAGTTCCATTTAGGAACTGAAACACAAGTCAGATTTCCTAGTTGGAAAGTCAGGAGAACCTCACCAGCCCTGAAtttagaatccaagatggctgcaccgCACATCAACAGTAATACAGACAGTAGTAATGttagcacttccatttatttgtGTGTCATTAAATCAGTCTGTACACACAGTTCTGTTTAGCTTCTGTCTGTGGAcatgttttaatgatgtttggATCTGCAAAATATCATATAATCAACTATACAAGTGTTTTCAAGACTGTCAAACCAGTTGTAATAAactctaaaatatttaaattactgtTAAATGTTTTGCAACTGTTTACAATTATCTAAATGTGTAACTGGAACACAGTCAATCCAAGTATGGCACAATTCCCAGCTCCAATATCCAAGGAAAATGTAACGCAGCAAAAGACTTTGAGTATCAGTCAGTGGTAAAATATGTTAATACATTATGTGACGCAGTTCTTAGATGACTTTACTAGAGCTGTTATGATGCCGTCCTGTGCCAGACCAAAAATCGGATTTTAAGGGGTTTGTTTTGTCTAGAAAcctgctttttttctctttcttttattttttttttacaaaaacagacTGAAATTAAGCTTTATACCATCTTTTGGAGCTAAAACTGCATATTCAGCATGTACTGTATAATTTAGCCAATTTCTGTTAGTTATTCCTTTGAGTAAATCACTTTACCTGGGTGATTTATTTGCAGCATCTAAATCTACTTCACAAGAGCATGTATTGTAATGAATATGCATGCTGTTCTAACACATGTGGGTGAATTTCCTTAATTAGGTAACTGAGAGTATTTCATTCATATATTTATGGACTTTGGCTTTGTACCTTGGGTGCCATACCTACAGTACATGTATGCATTCTCTTAAATGAATATCCTTCAAATCCTTTATTCATAAAAATGCAAATCATATTTctaaatggttaaaaatgacATGGATCTATAATTGGTAAATAAGCCAGCCTTACTTTTCTCTAGCTTTTGTCACTCTGGAAAGGAATGGCACCAGAAACTGGCATGCAAGGGCATGTGTGGAAAGCACCAGCTAGTACCTGCAAAATTCACTGGATCCCAGGCAGATTGGACCTgctttaacattatttattggCTCAATAACTTATGTTGCACTTGTCAGTGACAATTTTCctacacactaaataaaccCAAACAGCTTGAATATTACTATTGATAGAACATGTGGCATGCTTATTTATTatcatcttttgttttatatttatacgaCGAGGAACGCATTTGTTTAACCTCCTTAATATCCTTCAGGCAATTTCGTCCAACAGATATGACAGATGCTTCCTTGTGCTGTGCTGAGGTGCGATCAAAAAGCTGTGCAGTTGCTCCTCTCAAAGTGCTCTTTCCTAAGCAGCATAGGCAATGACCAGACTAGATTCCGCTGTCTGTACTTTTGTATTCAGTTGCAGCTTTGCAAAAACTAACcactacaatataaatataatatatatatatatatatatatatatgtaaaatgaatggggaaaaatatttaattatatatttcagCTTTGTTTAGGGATGATTGTGCACATCACTCCAatgttcaatttaaaaaaaaaaaataccacctGTCTGTTGTGTGACCTCTGTAAAGTGAGAACTGTCTCAAACAGGATATCTACACGACTTCTTAACAGATGTCTAATGAAAGTTGTGTCTAATGTAAAATCCATTGCATACAACTTCAGGGAGCTTTGAAGTAAGTGTTCGTCTATTCCCAATAAATGAAGGTAAAAAGTa

Function

symbol description
fbxo31 Predicted to enable cyclin binding activity. Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to act upstream of or within mitotic G1 DNA damage checkpoint signaling. Predicted to be part of SCF ubiquitin ligase complex. Human ortholog(s) of this gene implicated in autosomal recessive non-syndromic intellectual disability. Orthologous to human FBXO31 (F-box protein 31).

NR:

description
F-box only protein 31-like isoform X2

GO: NA

KEGG:

id description
K10308 FBXO31; F-box protein 31

RNA

RNA id representative length rna type GC content exon number start site end site
TU98666 False 451 TUCP 0.64 1 12564348 12564798
TU98667 False 619 TUCP 0.64 1 12564348 12564966
TU98668 False 527 TUCP 0.64 1 12564348 12564874
XM_022671915.1 True 4717 mRNA 0.46 9 12548690 12564978

Neighbor

gene id symbol gene type direction distance location
LOC103039697 NA coding downstream 59510 12485646 ~ 12489180 (-)
LOC103038241 kras,rask,LOC105900436,LOC103038241,LOC107675271,LOC108428819,LOC108274959 coding downstream 92656 12445676 ~ 12456034 (-)
LOC111193054 NA coding downstream 199704 12343475 ~ 12348986 (-)
LOC103035544 LOC107742058,LOC107675302,LOC107595230,LOC107758756,LOC107549283,LOC108275297,LOC107675455 coding downstream 507628 12036675 ~ 12041062 (-)
LOC103034366 tnni2,LOC103034366,LOC108428827,LOC107742057 coding downstream 512643 12033289 ~ 12036047 (-)
polg polg,LOC107557431 coding upstream 22261 12587239 ~ 12602241 (-)
rhcg rhcg coding upstream 73893 12638871 ~ 12651916 (-)
gdpgp1 NA coding upstream 93915 12658893 ~ 12661807 (-)
unc45a unc45a coding upstream 97763 12662741 ~ 12674522 (-)
LOC103043208 furin,furinb,LOC107581806,LOC107720773,LOC107750721 coding upstream 157299 12722277 ~ 12871382 (-)
G73119 LOC108428815,LOC108428741 non-coding downstream 9460 12502863 ~ 12539230 (-)
G73125 NA non-coding downstream 37769 12510041 ~ 12510921 (-)
G73098 NA non-coding downstream 352112 12194573 ~ 12196578 (-)
G73030 NA non-coding downstream 421867 12125536 ~ 12126823 (-)
G72974 NA non-coding downstream 813844 11734144 ~ 11734846 (-)
G73159 fanci,LOC107670230 non-coding upstream 8333 12573311 ~ 12574584 (-)
G73162 fanci non-coding upstream 13880 12578858 ~ 12582454 (-)
G73173 NA non-coding upstream 48628 12613606 ~ 12620513 (-)
G73176 NA non-coding upstream 56704 12621682 ~ 12624418 (-)
G73238 NA non-coding upstream 296135 12861113 ~ 12861628 (-)
LOC111193053 tnni2a.2,LOC108428758,LOC108275295,LOC103035007,LOC107549280,LOC107595232 other downstream 497201 12048626 ~ 12051489 (-)
LOC111193052 NA other downstream 1003444 11520887 ~ 11545246 (-)
LOC111193093 NA other downstream 1322736 11224779 ~ 11225954 (-)
LOC103046452 rassf7 other downstream 2386206 10101773 ~ 10162484 (-)
LOC103037069 LOC103037069,LOC108442462,LOC101069290,LOC107675263,LOC107562830,LOC107707530,LOC107085412,LOC101171241,LOC103151621 other downstream 2494656 10051952 ~ 10054034 (-)
G73172 NA other upstream 45856 12610834 ~ 12621356 (-)
LOC103025073 dynlrb2,LOC103025073,LOC106573385 other upstream 1977218 14542196 ~ 14545536 (-)
hbp1 hbp1,LOC107732286,LOC107701066 other upstream 2144080 14709058 ~ 14797283 (-)
LOC103037068 cpne8,LOC108274474,LOC107679956,LOC107752477,LOC107723993,LOC105026415,LOC106561599,LOC105028206 other upstream 2558836 15123814 ~ 15214284 (-)
LOC103040324 NA other upstream 2816351 15381329 ~ 15414613 (-)

Expression


Co-expression Network