G73173


Basic Information

Item Value
gene id G73173
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 12613606 ~ 12620513 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU98710
GAGGAGGGgaggcaaagaaaacaaatgaactgGCACCGATTGCAGCTCGGCCTGCCATCTTCCTTTGTTTCGACCGCTTTGTGCTTCTCTAACATATGAACATCAAGCGGCGTTCGTTAAGAGCCGGACGAGCAGAATTCCTTGTTGCCGCACGACTACATTCGTATTTTAGCTGTAGCATGATGAAATTTGGGTGCCAATTCAAatatcatttattcattcattcattcattcattcacacacaatatattcctattttttaaaaataaattattgagaAACTCCTAAAAGAAAGCCTACATCattttcataatatttttaaatggcaGAATTGTTTAcatatattagatatataagACTCCCATATAAGTTATATCATCGCTGTCAAACAAAGATCTTACAAATCCATAATTAGCAACTTTTCTTAACTTTTCAGTGGAcgtaaatgtacattttaaagcCATCATAAGATTTGGTCacatgtaaagaacaactgctataacactatataaaacattttaaaaacaaagatacaGTTATTTTTTGTGACAGCAAAAAATGCTATATTTTAACAGATCACATTGtccatttaaacaaaaattaatCCCAAAACAGTAGTGTATCCCACAATCGGCACCAAGTAGGTTTTAATGAATTTCTCCTTAAGAAAATTCAGGACATTTTAAATAAGATTTTATGTTTAGGATTTATATAAATGCACTGCTCTCGTATTCTTATGTAAAGCAGAGATAGTACATTCAAATccagtgtttattttagtttaattaaacaaataggCCTTTAACCTCCATTATAAGCCTTCAACCTTTCAGCTATTATGCACGTACCcccaacaaaatgaaaaacacacCAAGCCTTCCTGCACTATTACTGTTGGAATGGTGCAGAGAATAGATCCCCTGAGAAAGTTTTTGGGCCAGAGCGGTGGGAAATGTGCATCTATCTATACCACACTTATTTACAATTcaaatctttctcttttttctcttaaagTAAATAGTTTTGTTTGCAGTCAGGGGTGGATAACGAGAAGAAAATGGAGAGGAGACAATAAAGCAACTAGCGCTGCTAATGAGTGGGGCTGAGCAAAGATCCTCTTGACATAGTTGCATTGAAAGGGAAGAAAGGGCCAAAGCCTGAGCCTGTGCGTGTGAATGAGCGCGGCAGCATCCCAGAGGCACTTCCCATACACCCTGTGCAAACTGCACCCTGCACCATTCTGCGGCTTTCACTCTTCTCCATTCCCAAACCCTCGGCAGGATTCATTGCCTGTAAAAATGTTAGTTAGTTGAATAAGTGAATCAGAGAATGAGgagttgaatgaatgaatgagtgaatgaatagAACTCCAGAATACTTTAGAATACTTCCCAGAGATATTATCAGGTAAATTTGCTGGAAAATGGAAGGATTGCtatgtttattctgttttgtttaatatatattgttacaATTAACATGTATTCCTtgtgtactttactgtactattctgttagtattaatattatggCAGCATTTGAGTTAACTTTACTCAATTGTAGCCATATCTGGAGACACAAAGGGGAAGCAACACAGTTTATTTGTATACAATCTTAAAccattaaacagttttaaaattttAGCTTCATACAAAATATTCAAAACAGATTTTCTCAATAGGTTAAATTCTTTCTATGATtcagtgtaatttttatttttgtagaatCATATGTTCAGgccaaaaacattataattataattcttTAAATTTACACCATTCAAACACAGAGTAACACATACTATGTGAATAATATGCGTTACATCAGCAAAACATGCAACATGATTGAAAGCAGCTGAGTTGCTGtcccatattttattcacagtgCCACGTTTCAATCCTGAACCCTTTTACCCACAGATCTTTATTCCACAGAGCTTTATTGTTAATGGTCTAGCTGACAGTAGAGTGTCATGGTTGTGGTTTGCCTTCTTACATAGCTGTGccctgtatgtgtgtctgtgtgtgtacatgttgtGTAAAGGCGATGCAGTGGCGCGTTCCCTCCCTCTGCTCTCTGGCTCCCTGGCTGCGGCTGAAGCGGCACCTCTGTGCCCCTGGCTCTCTTGGCCTCCATTTTGAAACTCAGCGAGGGCGAGATGGGTGCGGGCTGCCATGGGGCCGGCAGCTGCAGCACCATGCCTTAATGAACAGAACGTGGTGTCTGCCATTATTATTCTGCCCCACTCGCGTCTTCCCTCCCTCAATGGGAGCCCCCCCCTCCCCTCATAAAGAACCTCGACGTTCCCACCATTGTCAGGACTGGTACTTCTCCAGTGCTGCTTGAAGGGGGGCAGGGTGGGAAAGCCCGAAGCAGACTAGACACGACCAGATGCCAAAGACATGAGACTGTTATGCAGATCGGAGAGCTTTTGTGAGGGAGagcgtacgtgtgtgtgtgtacatatgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgtacagGAGCAGGCCATAGGCCACCTGATCATGTTAATTGGTCTACTCGCTCCTAATGCTTGTCTGCCAGAGATGGAGATGTTGTTCGTTGAGGTGGTCCGAGTGAAAGGGGGCATGTGGCTCCTGTCCAACATGCATATAGTACATAAATGTGTACACTACATCAGCAGTAAAGTTTTACTGTGCCGTTACAGCTTATTCTAACTGACCATTTTATGTAGTGCTGTTGCATATTTTAAGTAGACTGCAAACACTCAAACTACATTTCTTTAATCTCATCCTTACatattacttatatatatacttatattactatgatatatatatatatatatatatatatatatatatatatatcatatagcatatatatagaatttatataaattgttgatactaaataattttagtgagtaataaataatagtttaacattaataacagaatGATCAGTCTAGTATTTAAAGGATTAATGAGGTCAGCTATTAAGTGTTAATGTACAGTGTACTACAcctaaaaagttttaaagaagATTctgatcaatgttttttttttatcattgctGTGAAATAATACCTTGtgtcttcaaaacagcaacattacaggagaaggaacATTTACTTCACTTAAAGTTGCTGTGAAAAGAGTCactttagagcattttttgggTTCATTAATGAATTTAGCCATTTCCAAATAATTTCAAAAAGTCTGACTTTACAGAATAGGGATAAAAAGGTTTTGTCTGGCAGCAacattatttggaatttgtccAATTAACAAAGACAATGGAATCCATAATTTAATTAACACCACGTGTTTAATAACACATAATTGAGTTGCAGGTCCATATATGAAATAGGCATGAAAAACTATAATAGATAAATTGTGTTCCAAATAAGCAAATCAGACAATGTATTAATGTGTATAGTAAAATTGTATATAGTTAATGATGTTCAGTGGAATTATTTGCTTTATGatttaagaattttaaataCTAATTTTACCCATTAAGAAGCAAATAACATTATGTGTATTTGTATTGCACACTTTGGCTACTATATTGTATGGtccctgtttttatttatttcacataaTGTGTGAgattgaaatgtaaaaaaaaaaaaaaatgttaatttgctATTGGAATCCATGATATGCAAATATGCATCCCTGGTATAAAGTGATTAAAATATACTAGTCCTGCTCctcctttaaataataaataagaaaaaatacagaataagtGTTAGATGTTTTGCATGTAATGATGAACAGAGATGCAGATGATCCTAAAATGGCTGTAAAAACTGTCAAAcgtaaaagattaaaaaataaagaaataaataataaaaatttgtGCTTTACAAGTAATTATCAAACTTCATATTTGCAGTTTGTGTGCTGTTTCCAGAGTAATTAATATCAAggaaaactatgaaaaaatatgttttatgtgcTGTAAAATCGTTAGTGTAATAGCTTCatcacataataaaaataattaatgtagtTTCAGACATTTGACATTATTAGGCTGTGCATATTAAAGCCATTTGTAAACATATTCCACAAAGCATATAAAAGCATGGATTTGAGCTTCGGAACCACTGTGTATTGATGAAGGTCACTTGCCATCAAACACTGGCACCTTCTGCAGTTTTAGGTATTTGAAGCAACAAGATCAAcaaataatgagagagagatagaataaTGAGATAGAgataaatgagagagagagagagaaagagagagagagagagagaaaattaagGAACAAAGGCTCAGAACACACTAAGGTGGATAGACCCTGCTGGAAATCCATCGTAGgaacaaacagcaaaaacaaatgaTGGACAAGAAACGACAGAGCAGGGAAAgatgagatagagagagaaaaagagagaaaggtgaAGCGGTTGGTGTGTTTGGAGATTGATTGGCTCAGGAGAAGAGGAAGGGGAGGGGGGAGCATGTGACATTGACGAGGAGATGAGGCGCCATGGTTGGTTTCGTGCTCCAGCTACTGTAAATAAGAACGCTGGGCTGTTGTGTGGCAGAGTAGCCTAGCAAAGCATCACTCTGCAGATCCCAGTTACAGCCTCACTGTTACAGCACTTGCAGCATGTGTGGGTTTCAGGGTACATTCATACGTGGtcagtttatatatatgtgtgtgtgtgtgtgtgtgtgtattttttatgtgtatgaGACAGAAGCTGGAAGTGAAAAATTGGCGCAAACTCTTTAGAATAAATGCTTGGTGTACATTTCTACTGTGCATTTGTACGATTTTGGAATAAATCCCTTCATattaaaactttgtttttatatatgacACACTTCTTTGCTGTATAAACAATTCATACTGATCAACAGAAATGCAGccaatttacttaataaatctgtaatttaaaataacatcacaTTACACTGATGTACATCAGTCTAAAGatctaaagagagagagttttgtcattatttatattgttttttgaaGTGTATTATTTTAACCGCAGATCATTTTAATGAAGGCTAATGTGTTAAAGAGGAGGGAGGATAATGATACATACAGTCTGATACGTTTATTAAAATCCGAGCTTAATTCGAGACGAGGCACAGTTAGCTGAAATTTAGGTCAAGTGCCTGGGGGGTCAAACTGCAAGATTCTTTGTGTCATTGGGCCACTGTTGATAACTCTTAACGTCTGCTTAATGAGGTACAGTAAATCCTCATCTTCTTGCTTAGAAACAACAACATGGGATCATTTAGTGGGTATTTGGGTGTATACATTTAGAAGCTATTGATAAACAAGCGGTGCGCGTCCGTTGGGGTGGTTCTTTACATATGAACGCTTTAAACGTCTTGATTTCTGGAGTAGTCAAAACACTAGTACACAATTACAGGAGCAATGTTTTAGAAAATTCGGAAAGGAGACACACACAGGACTGTAATAAATGCTTGGATGATATATTTTTCAAGAAATAAcaccaataaacaatattattgtcattttaaagccaCTGAAGCTCTTCCAATCAATAATTTCAAAATCAGTTATTCTCTTTACTATTGTAAGTTGTTTTACTTTACGTAACTTCATGAATAGGAAatgtaaatactaaataaagttaatttttattttttattgtaaaaaaggaACAGAAAGAATAAGTAATTTCTCTGAAAATGGAATATAGAAGATATAGATTTTCTTTGCAAGGAACCATAATACTActgataaaatgaaaatataccaGTATAATTATACAATAACACCAATACAATAATATTGAGAAAAAGCATGTTATTTTCTTTACCTAGCGTTGTCCACTTTTTGTGTATAAAGTTGCCGTTTTTGGTGCATTGGCCATTACACAAATTGTTAAAATATTGGTCAACAAACATGCATGGAAACACAATGGACAATATCaaggtcagcaaaaaaaaaatattatgtccctttattgtacgataagtcgaCAACATAATTATTGCTACAGGCCTTCGTACAGTAATTAAAGCCGTTCTGGAGGTCAGTGCTCAGGTCACACAAAGACCAGGCCTTCACTACTTGTAAGTCTGGACAATACAGAAGATCCACCGGCTTTGGCAGGAGCGTTAAACCGCCCTCACACGCCATTCAAAAGCTTGGATGACATCCAATGTAGGTCAGGCCTAATCTTTGTCCGTTAATGCAACTTTGGCCGAGACTAATCTATCACAAAGAATGTCTTAAGTATCTCCCAGGAAGACAGAGAAGTTCTTCCAGTCCAGGCTTTTCAGATTAGAGGCTGTCTGCATGAGGGACCCAGAGGCAGGGGTCCTCCACTAAGAGTGAAATGAGAGTAAGGAAGAATTAGAGCTGGCCGGAGCTGTTAATATAGCGCTGCTGGATAATCACACAGGGGGTTATACGAGGGGTGGGCTGGAGTgtgacctgttttttttaattgtctctCCTTCTTaataagttaaaatagttctgtTCCTGACTGATTGTACAAAGTCAATTAGAAATATGTCTCTGATTTACAGTAcagttctgtattctgttttaaTATCGTCATTAATGCATGGCAAGAAATAGGTCTATGTCTGCTGATCAACAGTGTATAGCTAAAGATAAGAAGAATGAGAAAATTATAAGTCTTTAAATTGTAAAGATGCGAACTTTGATTGTATCACAtgcattaaaaagtaaaatgttttaaatataagatCAGTAGTAAAtaagctttataagagaaagagtTTCTGTGTTTCCGCT

Function

GO:

id name namespace
GO:0048468 cell development biological_process
GO:0030154 cell differentiation biological_process
GO:0030182 neuron differentiation biological_process
GO:0021872 forebrain generation of neurons biological_process
GO:0021879 forebrain neuron differentiation biological_process
GO:0021884 forebrain neuron development biological_process
GO:0048869 cellular developmental process biological_process
GO:0021953 central nervous system neuron differentiation biological_process
GO:0021954 central nervous system neuron development biological_process
GO:0048666 neuron development biological_process
GO:0007399 nervous system development biological_process
GO:0007420 brain development biological_process
GO:0030900 forebrain development biological_process
GO:0022008 neurogenesis biological_process
GO:0048699 generation of neurons biological_process
GO:0060322 head development biological_process
GO:0003676 nucleic acid binding molecular_function
GO:0003677 DNA binding molecular_function

KEGG:

id description
ko04360 Axon guidance

RNA

RNA id representative length rna type GC content exon number start site end site
TU98710 True 6767 lncRNA 0.36 2 12613606 12620513

Neighbor

gene id symbol gene type direction distance location
polg polg,LOC107557431 coding downstream 11365 12587239 ~ 12602241 (-)
LOC103039697 NA coding downstream 124426 12485646 ~ 12489180 (-)
LOC103038241 kras,rask,LOC105900436,LOC103038241,LOC107675271,LOC108428819,LOC108274959 coding downstream 157572 12445676 ~ 12456034 (-)
LOC111193054 NA coding downstream 264620 12343475 ~ 12348986 (-)
LOC103035544 LOC107742058,LOC107675302,LOC107595230,LOC107758756,LOC107549283,LOC108275297,LOC107675455 coding downstream 572544 12036675 ~ 12041062 (-)
rhcg rhcg coding upstream 18358 12638871 ~ 12651916 (-)
gdpgp1 NA coding upstream 38380 12658893 ~ 12661807 (-)
unc45a unc45a coding upstream 42228 12662741 ~ 12674522 (-)
LOC103043208 furin,furinb,LOC107581806,LOC107720773,LOC107750721 coding upstream 101764 12722277 ~ 12871382 (-)
rag2 rag2,LOC107581808,LOC107720771,LOC107673237,LOC107750738,LOC107670203 coding upstream 323940 12944453 ~ 12949439 (-)
G73162 fanci non-coding downstream 31152 12578858 ~ 12582454 (-)
G73159 fanci,LOC107670230 non-coding downstream 39022 12573311 ~ 12574584 (-)
G73119 LOC108428815,LOC108428741 non-coding downstream 74376 12502863 ~ 12539230 (-)
G73125 NA non-coding downstream 102685 12510041 ~ 12510921 (-)
G73098 NA non-coding downstream 417028 12194573 ~ 12196578 (-)
G73176 NA non-coding upstream 1169 12621682 ~ 12624418 (-)
G73238 NA non-coding upstream 240600 12861113 ~ 12861628 (-)
G73281 NA non-coding upstream 368673 12989186 ~ 13088436 (-)
G73302 NA non-coding upstream 617440 13237953 ~ 13238314 (-)
G73322 NA non-coding upstream 796144 13416657 ~ 13417462 (-)
fbxo31 fbxo31,LOC107675295,LOC107751272,LOC107742043,LOC107662464 other downstream 48628 12548690 ~ 12564978 (-)
LOC111193053 tnni2a.2,LOC108428758,LOC108275295,LOC103035007,LOC107549280,LOC107595232 other downstream 562117 12048626 ~ 12051489 (-)
LOC111193052 NA other downstream 1068360 11520887 ~ 11545246 (-)
LOC111193093 NA other downstream 1387652 11224779 ~ 11225954 (-)
LOC103046452 rassf7 other downstream 2451122 10101773 ~ 10162484 (-)
LOC103025073 dynlrb2,LOC103025073,LOC106573385 other upstream 1921683 14542196 ~ 14545536 (-)
hbp1 hbp1,LOC107732286,LOC107701066 other upstream 2088545 14709058 ~ 14797283 (-)
LOC103037068 cpne8,LOC108274474,LOC107679956,LOC107752477,LOC107723993,LOC105026415,LOC106561599,LOC105028206 other upstream 2503301 15123814 ~ 15214284 (-)
LOC103040324 NA other upstream 2760816 15381329 ~ 15414613 (-)
LOC103046265 pkp3 other upstream 3137790 15758303 ~ 15780678 (-)

Expression


Co-expression Network