G73177


Basic Information

Item Value
gene id G73177
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 12639245 ~ 12641822 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU98715
ATTTTTGGATTGTTGGGTTAAAAATGATGTACACAGCAAATTTGtcagtgttaaaataaaactagaATTTTATGAGTCACGTGTTAATTTTACTCTGACAGTGTTGAATGAGCACTGGCAGATTTGTTGTGTAGAAGTAAAACGGCAAAACCCACCTTCTATTTGATCATATTAAATGTTGCTTAAAAACTCTGATACTGTAAAACGTCACTGTCTGTCAggtgttacttaaaaaatgctatttttggagaattaataaataactgaaacaAATTATGTGTtcaatttctatttattttcatgtgttttatgtATAGTCTctgatatttataaaaatatagtgATACAGTAAATGGGTCCCCTAATTCTTTCAGTCCACAGATGCTGGTGACGGGGTTACTGGTGTGAGGGATACAGTAGAGGAGATcttgctgtgctgctgctgctgctgctgctgctgctagtagAGGAGAAGGTGCAGACTCAGGGTTGTAGAGAGGAGGCTGGAATCACATCCCGGTTGCAGGATTATTGCTGACCCACAGTGAAGCGAGTTTCAGTTACTTCTACATGATTATTGGCCACTGTGTGATTGTTGTAGTGTAAATCCGCTTCAACAGGCTCTTCTTCATCAGGCACCTCCCAGTAGATGACATCATCAAAGCATTTATCATCTGTTGGATCTCCCCAGAGGGGCATCCTCAAGATTAGACCCACAAATATTCCACCTCCTATTCCAAaacatatagacacacacattGCAGCTGCCTGGAATCCGCCTTGGGCAGCAGGAGTCCTGTTCTTGAAATCACCAGTAAAATCAAATGTATCTTTCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98715 True 838 lncRNA 0.40 4 12639245 12641822

Neighbor

gene id symbol gene type direction distance location
trnar-ucg_4 NA coding upstream 35821 12603352 ~ 12603424 (+)
fanci fanci,LOC107673243,LOC107670230,LOC107564606 coding upstream 51702 12568837 ~ 12587543 (+)
LOC103039298 NA coding upstream 91567 12490584 ~ 12547678 (+)
LOC103039191 LOC108428816 coding upstream 153836 12458545 ~ 12485409 (+)
znf469 NA coding upstream 221888 12365365 ~ 12417357 (+)
man2a2 man2a2,LOC107750719,LOC107720774,LOC107670215 coding downstream 38284 12680106 ~ 12715658 (+)
LOC103044030 LOC103044030,LOC108428802,LOC108428756 coding downstream 255963 12897785 ~ 12909061 (+)
rag1 rag1,LOC107750737,LOC107670202 coding downstream 292630 12934452 ~ 12942962 (+)
ehf ehf coding downstream 1020987 13662809 ~ 13677076 (+)
pdhx pdhx coding downstream 1052606 13694428 ~ 13765050 (+)
G73146 fbxo31 non-coding upstream 74453 12564133 ~ 12564792 (+)
G73091 NA non-coding upstream 81393 12557634 ~ 12557852 (+)
G73082 rask,kras,LOC108274959,LOC105900436 non-coding upstream 183241 12450486 ~ 12456004 (+)
G73081 NA non-coding upstream 190731 12445693 ~ 12448514 (+)
G73045 NA non-coding upstream 442535 12194572 ~ 12196710 (+)
G73189 unc45a non-coding downstream 22145 12663967 ~ 12669729 (+)
G73191 NA non-coding downstream 33164 12674986 ~ 12676348 (+)
G73214 NA non-coding downstream 305824 12947646 ~ 12952320 (+)
G73288 NA non-coding downstream 455919 13097741 ~ 13098590 (+)
G73292 NA non-coding downstream 515947 13157769 ~ 13158679 (+)
LOC103022150 brsk2a,brsk2b,LOC107707552,LOC107675281,LOC107600443 other upstream 2012281 10272919 ~ 10626964 (+)
G72621 NA other upstream 2557105 10078579 ~ 10082140 (+)
LOC103043718 LOC103043718,LOC108442465 other upstream 2669203 9968506 ~ 9970042 (+)
G72281 LOC107754548,LOC108274935,LOC107754545,LOC107754498 other upstream 3489826 9142899 ~ 9149419 (+)
LOC103030246 pcdh2ab8,pcdh2ab10,pcdh2ab12,LOC108430950,LOC101884096,LOC108274577,LOC107588388,LOC108430926,LOC108430925,LOC108430922,LOC108275110,LOC108430948,LOC108275111,LOC107588302,LOC107660888,LOC107754492,LOC107655665 other upstream 3603219 8869128 ~ 9036026 (+)
LOC103043719 NA other downstream 229662 12871484 ~ 12897931 (+)
G73533 NA other downstream 2007007 14648829 ~ 14649551 (+)
rpgrip1l rpgrip1l other downstream 2249712 14891534 ~ 14921003 (+)
svip svip other downstream 2930480 15572302 ~ 15577533 (+)
G74169 NA other downstream 3644854 16286676 ~ 16288329 (+)

Expression


Co-expression Network