G73189 (unc45a)


Basic Information

Item Value
gene id G73189
gene name unc45a
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 12663967 ~ 12669729 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU98733
TAAAGTATGAACATGACTTCAATACCGGAAAGGCCCTTAATCAGCTACTACAAATGGTTTGATCCATAATAAGCATACTGTATCACACCAAAGGCTAAACTgagtaaaaaacaacaaaataactcACCACGTCGGGGATCCGAGCACACACCTCTGGCATTTCTCCAGTCAGCACTGCCAGAGTTCCTGCTGCAGCCTTCCTTAGCCTCTCATCATCCTCACCACAATATAACACCAAGAGTTTCAATCGGTCACTGTCTGTTGCCAGGTAAAGCTTCTGTACCTCAGGGCTTAAGACCAAGTTACACATGCACTCGGTAGCTGCTGCTCGCACAAGGTCATGCTCCTCAAACATGTAGCCCTCTATTTTAGGCACCGCTTTCTCCTTAATGATCTTCTGTCTAAGTCTATCACTAATGCCAGCCAGGTTAGTGAGAGCCATCAGAGCCTCAAAGTTCTGCAGGAGAGAACATTCCAGAGCCAAGAGACTGACCAGGGGACGCACCACCTCAtaaactctctctccaggAAAGGCAATCTCAGGGTTGGAGGTGATTGTGATCTTGGCCAGTGCTTGTGCTGCTTTGATCTTGCCCACATCTGTGCTGTCTGACACCAGAGGTAACAAGGCTTTTCCTCCTCCTTGTGCCACTACTGTTCCTCTGTCCTCCTGCCGCTCTACCAGAGCCAGGAACACTCTGGCAATGCATTCTCTGCATGTCTCAGTGAGTGCAGGGCTTTCTTGTTTGACCATACACACCAGTGCTGACACCACCCCGGCCTCCAACAGCTTGACCAGCCGCTTCTCCACAAAAGATTTTGCATCCTTTGGATGCTCTTCAGGTACATGCTGTTTGGCATATTTGGCCAGTTCCACCAGCTGCGGATCCGGCTTCTCCACTTCATAACTGTTGGTACAGTTTACCAAAGTAGATCCAATGGCAAACAATACAGTCTTATCCTCAGacttAGCCAGCTGAAACATGGCCTGAAGAGCATTCTTATCACCCACCAAGTCCTCCTTCACATCAGCATCAAAGGTGAGGTAGGCTAGACCTTCAATAGCCCAGCGGCGGGAGGTCTGAGGAAGAGAATCATTACACAGCCACTTCCTGCACTGTTTGGCGAGTTTGAGCGTTGACCCTTCTGCAAACTGCTTCATGCTGAAATCTGTGCCTCCTGCTGATCCAAGTTTACACAGTCCCACAAGAGCTCGCACTCTTATCTGCTCATTTTCACTCTTCTTATAAAGGTCCTTCAGCAGTGCCACTCCATTGGCTGTGATAAAGGAGGCTCTCTTTGCCTTGCCTGCAGCATGGATTAGTGTCTCTACTGCCACCTGTTGGTGGGTGATATTCTCAGAGGCGCACAGAGAAATGACAGCTTCCATGATGCCAGACATCTCCAGAGTGCGGTTGCCAACATCACTAGGGCCCTGCAGAAGGACCGAAACAGTCTGTATTGCACGCAGTTTATTCTCCAATCCTGAGCCTTCA

Function

symbol description
unc45a Predicted to enable Hsp90 protein binding activity. Acts upstream of or within angiogenesis; blood circulation; and cartilage development. Is expressed in brain; digestive system; head; polster; and presumptive neural retina. Orthologous to human UNC45A (unc-45 myosin chaperone A).

NR:

description
PREDICTED: protein unc-45 homolog A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98733 True 1496 lncRNA 0.49 10 12663967 12669729

Neighbor

gene id symbol gene type direction distance location
trnar-ucg_4 NA coding upstream 60543 12603352 ~ 12603424 (+)
fanci fanci,LOC107673243,LOC107670230,LOC107564606 coding upstream 76424 12568837 ~ 12587543 (+)
LOC103039298 NA coding upstream 116289 12490584 ~ 12547678 (+)
LOC103039191 LOC108428816 coding upstream 178558 12458545 ~ 12485409 (+)
znf469 NA coding upstream 246610 12365365 ~ 12417357 (+)
man2a2 man2a2,LOC107750719,LOC107720774,LOC107670215 coding downstream 10377 12680106 ~ 12715658 (+)
LOC103044030 LOC103044030,LOC108428802,LOC108428756 coding downstream 228056 12897785 ~ 12909061 (+)
rag1 rag1,LOC107750737,LOC107670202 coding downstream 264723 12934452 ~ 12942962 (+)
ehf ehf coding downstream 993080 13662809 ~ 13677076 (+)
pdhx pdhx coding downstream 1024699 13694428 ~ 13765050 (+)
G73177 NA non-coding upstream 22145 12639245 ~ 12641822 (+)
G73146 fbxo31 non-coding upstream 99175 12564133 ~ 12564792 (+)
G73091 NA non-coding upstream 106115 12557634 ~ 12557852 (+)
G73082 rask,kras,LOC108274959,LOC105900436 non-coding upstream 207963 12450486 ~ 12456004 (+)
G73081 NA non-coding upstream 215453 12445693 ~ 12448514 (+)
G73191 NA non-coding downstream 5257 12674986 ~ 12676348 (+)
G73214 NA non-coding downstream 277917 12947646 ~ 12952320 (+)
G73288 NA non-coding downstream 428012 13097741 ~ 13098590 (+)
G73292 NA non-coding downstream 488040 13157769 ~ 13158679 (+)
G73298 NA non-coding downstream 555942 13225671 ~ 13225955 (+)
LOC103022150 brsk2a,brsk2b,LOC107707552,LOC107675281,LOC107600443 other upstream 2037003 10272919 ~ 10626964 (+)
G72621 NA other upstream 2581827 10078579 ~ 10082140 (+)
LOC103043718 LOC103043718,LOC108442465 other upstream 2693925 9968506 ~ 9970042 (+)
G72281 LOC107754548,LOC108274935,LOC107754545,LOC107754498 other upstream 3514548 9142899 ~ 9149419 (+)
LOC103030246 pcdh2ab8,pcdh2ab10,pcdh2ab12,LOC108430950,LOC101884096,LOC108274577,LOC107588388,LOC108430926,LOC108430925,LOC108430922,LOC108275110,LOC108430948,LOC108275111,LOC107588302,LOC107660888,LOC107754492,LOC107655665 other upstream 3627941 8869128 ~ 9036026 (+)
LOC103043719 NA other downstream 201755 12871484 ~ 12897931 (+)
G73533 NA other downstream 1979100 14648829 ~ 14649551 (+)
rpgrip1l rpgrip1l other downstream 2221805 14891534 ~ 14921003 (+)
svip svip other downstream 2902573 15572302 ~ 15577533 (+)
G74169 NA other downstream 3616947 16286676 ~ 16288329 (+)

Expression


Co-expression Network