G73191


Basic Information

Item Value
gene id G73191
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 12674986 ~ 12676348 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU98736
gtcaattctgtcgtatatttacattttctcctgcgcttttttttttactgagagctcttcttaagatggtgtccttttttgtaaaagaatgtaactttaagtttcatagagatttttataaacatcaggacatgtggtcttactgtgaactacaaatgaacagaagtcacgttacagcagtgtttatcaatcctgttcttacatattctactgcatattaacactgttctgcatattttagagcttcctctgctttaaaggcatttaataaagttagtggtggtatgatgtgtctaatacactgctggatatacataatgattaatttaggctccatagggggctaaatttgcacactgtcttgttatttattattctttgtctgtattgtgttgtattgtctgtctgcacttttgtactgttgcactattgttctgtctacactgtgtttatgtgcaccatggtccctggaggaacgttgtttcgtttcactgtgtactctgtatatagctgaaatgacaataaaaaccactttgactttgactttaaaggattttaacaggtaaactcagtaaattactgtttattagctgatcagctggatcaggtggaaaatttttggggcagtgatcggggttaagaaactgctttaaactacaaacataaagaactgtactaaattctgactatccactacatctggcttctagttaactagttaactaaatgaatattcgttcattatagctcacagtaagtcctgtaatcctaaattaattgaaaatgaaacagtgattagctgatcaggtacagggcaagttgaacattacatatatagttttttttttctttaaccttgactcccaatctagctcattccaaagttaagctaactcactaacacagctgcagtttattaatcacagtgggtttaatctgtgggCTAATTCAGatacgtgtatttttaaccagctagcagaaacatatcatcacagttgacgTGGTTaacctatcgttacctttcttttagaaaaatctccgtatatccagatctgctttaaaatcagctgaagctgctgcaccccgatcccgctgctaaatctcacagcgagggggcggggcttccaaacagcaaactgcctctcctTCGCGCggcgcaaaaccagcaagctgattggctgtttctactgagaggcgggacttaatacctgaaccggcttcgtgattggtccggtctgtcttctcattaatagtacacctgatctgagcgaaaagatgtcatttttgggggggacaaatccacctgtttctaatattgggtgggacatgtcccacccatcccccccggttcctacgcctatgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98736 True 1363 lncRNA 0.39 1 12674986 12676348

Neighbor

gene id symbol gene type direction distance location
trnar-ucg_4 NA coding upstream 71562 12603352 ~ 12603424 (+)
fanci fanci,LOC107673243,LOC107670230,LOC107564606 coding upstream 87443 12568837 ~ 12587543 (+)
LOC103039298 NA coding upstream 127308 12490584 ~ 12547678 (+)
LOC103039191 LOC108428816 coding upstream 189577 12458545 ~ 12485409 (+)
znf469 NA coding upstream 257629 12365365 ~ 12417357 (+)
man2a2 man2a2,LOC107750719,LOC107720774,LOC107670215 coding downstream 3758 12680106 ~ 12715658 (+)
LOC103044030 LOC103044030,LOC108428802,LOC108428756 coding downstream 221437 12897785 ~ 12909061 (+)
rag1 rag1,LOC107750737,LOC107670202 coding downstream 258104 12934452 ~ 12942962 (+)
ehf ehf coding downstream 986461 13662809 ~ 13677076 (+)
pdhx pdhx coding downstream 1018080 13694428 ~ 13765050 (+)
G73189 unc45a non-coding upstream 5257 12663967 ~ 12669729 (+)
G73177 NA non-coding upstream 33164 12639245 ~ 12641822 (+)
G73146 fbxo31 non-coding upstream 110194 12564133 ~ 12564792 (+)
G73091 NA non-coding upstream 117134 12557634 ~ 12557852 (+)
G73082 rask,kras,LOC108274959,LOC105900436 non-coding upstream 218982 12450486 ~ 12456004 (+)
G73214 NA non-coding downstream 271298 12947646 ~ 12952320 (+)
G73288 NA non-coding downstream 421393 13097741 ~ 13098590 (+)
G73292 NA non-coding downstream 481421 13157769 ~ 13158679 (+)
G73298 NA non-coding downstream 549323 13225671 ~ 13225955 (+)
G73301 NA non-coding downstream 561612 13237960 ~ 13238212 (+)
LOC103022150 brsk2a,brsk2b,LOC107707552,LOC107675281,LOC107600443 other upstream 2048022 10272919 ~ 10626964 (+)
G72621 NA other upstream 2592846 10078579 ~ 10082140 (+)
LOC103043718 LOC103043718,LOC108442465 other upstream 2704944 9968506 ~ 9970042 (+)
G72281 LOC107754548,LOC108274935,LOC107754545,LOC107754498 other upstream 3525567 9142899 ~ 9149419 (+)
LOC103030246 pcdh2ab8,pcdh2ab10,pcdh2ab12,LOC108430950,LOC101884096,LOC108274577,LOC107588388,LOC108430926,LOC108430925,LOC108430922,LOC108275110,LOC108430948,LOC108275111,LOC107588302,LOC107660888,LOC107754492,LOC107655665 other upstream 3638960 8869128 ~ 9036026 (+)
LOC103043719 NA other downstream 195136 12871484 ~ 12897931 (+)
G73533 NA other downstream 1972481 14648829 ~ 14649551 (+)
rpgrip1l rpgrip1l other downstream 2215186 14891534 ~ 14921003 (+)
svip svip other downstream 2895954 15572302 ~ 15577533 (+)
G74169 NA other downstream 3610328 16286676 ~ 16288329 (+)

Expression


Co-expression Network